RNA–Protein interactions for RNA: ENST00000521028.3

HOTTIP-203, HOXA distal transcript antisense RNA, humanhuman

TSL 5 BASIC

Gene HOTTIP, Length 3,345 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTTIP-203ENST00000521028 CDKL1Q00532 357 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 MTX3Q5HYI7 312 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 FAM219BQ5XKK7 198 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 PDCD6IPQ8WUM4 868 aaKnown RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 OXCT2Q9BYC2 517 aaPredicted RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 COQ6Q9Y2Z9 468 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 TTLL3Q9Y4R7 772 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 KRT37O76014 449 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 CYP1A2P05177 515 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 GTF2H1P32780 548 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 C21orf59P57076 290 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 TAF5Q15542 800 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 CCNG2Q16589 344 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 SUPT20HL1Q3ZLR7 823 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 FASTKD1Q53R41 847 aaKnown RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 PPM1JQ5JR12 505 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 STKLD1Q8NE28 680 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 DDHD1Q8NEL9 900 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 ARHGEF4Q9NR80 690 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 UVRAGQ9P2Y5 699 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 RSL24D1Q9UHA3 163 aaKnown RBP13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 STRIP2Q9ULQ0 834 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 ACTL7BQ9Y614 415 aa13.16□□□□□ -0.3
HOTTIP-203ENST00000521028 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 GMNNO75496 209 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 TCEA3O75764 348 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 GNA15P30679 374 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 RALGDSQ12967 914 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 CYP2A13Q16696 494 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 TRIM16LQ309B1 348 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 NOL9Q5SY16 702 aaKnown RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 MCOLN2Q8IZK6 566 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 CAPSLQ8WWF8 208 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 HEPHQ9BQS7 1158 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 PCDHAC1Q9H158 963 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 TBC1D22BQ9NU19 505 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 SLC9A2Q9UBY0 812 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 AP4E1Q9UPM8 1137 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 RNF103-CHMP3A0A140T963 221 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 TMEM247A6NEH6 219 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 LIASO43766 372 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 HNRNPCL1O60812 293 aaKnown RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 DNAJA2O60884 412 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 FKBP6O75344 327 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 OXSR1O95747 527 aaPredicted RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 GZMAP12544 262 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 XRCC1P18887 633 aaPredicted RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 PSMA2P25787 234 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 EPHA3P29320 983 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 CCR10P46092 362 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 SP2Q02086 613 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 KLHL38Q2WGJ6 581 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 PGS1Q32NB8 556 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 KIAA2013Q8IYS2 634 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 BANPQ8N9N5 519 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 FERMT1Q9BQL6 677 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 POLE4Q9NR33 117 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 MAP3K20Q9NYL2 800 aaKnown RBP13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 ST14Q9Y5Y6 855 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 ARID2Q68CP9 1835 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 MCM3APO60318 1980 aa13.15□□□□□ -0.3
HOTTIP-203ENST00000521028 MAGEB2O15479 319 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 AKAP10O43572 662 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 STRNO43815 780 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 E2F6O75461 281 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 TNFAIP8O95379 198 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 KCNA2P16389 499 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 CCND2P30279 289 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 OXCT1P55809 520 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 ARPP19P56211 112 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 PQLC1Q8N2U9 271 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 SMYD1Q8NB12 490 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 AZIN2Q96A70 460 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 OTUD5Q96G74 571 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 APOPT1Q96IL0 206 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 PRICKLE1Q96MT3 831 aaPredicted RBP13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 STRA6Q9BX79 667 aa13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 HBS1LQ9Y450 684 aaKnown RBP13.15□□□□□ -0.31
HOTTIP-203ENST00000521028 KRT19P08727 400 aa13.14□□□□□ -0.31
HOTTIP-203ENST00000521028 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
HOTTIP-203ENST00000521028 RPL22P35268 128 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms