RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 FGF2P09038 288 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 PRKAR2BP31323 418 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 B4GALNT4Q76KP1 1039 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 TCP11L2Q8N4U5 519 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 BCAS4Q8TDM0 211 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 WIPF2Q8TF74 440 aaPredicted RBP4.86□□□□□ -1.63
CLK4-207ENST00000520909 CHMP4CQ96CF2 233 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 WDYHV1Q96HA8 205 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 SCNM1Q9BWG6 230 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 ZNF518BQ9C0D4 1074 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 DECR2Q9NUI1 292 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 DNMT3BQ9UBC3 853 aaKnown RBP4.86□□□□□ -1.63
CLK4-207ENST00000520909 ANKRD6Q9Y2G4 727 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 RRP7AQ9Y3A4 280 aaKnown RBP4.86□□□□□ -1.63
CLK4-207ENST00000520909 PAXBP1Q9Y5B6 917 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 ANKRD26Q9UPS8 1709 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 PXDNQ92626 1479 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 CDK12Q9NYV4 1490 aaPredicted RBP4.86□□□□□ -1.63
CLK4-207ENST00000520909 PIK3C2AO00443 1686 aa4.86□□□□□ -1.63
CLK4-207ENST00000520909 BLMP54132 1417 aaPredicted RBP4.86□□□□□ -1.63
CLK4-207ENST00000520909 SMG6Q86US8 1419 aaKnown RBP4.86□□□□□ -1.63
CLK4-207ENST00000520909 ERVV-2B6SEH9 535 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 CTIFO43310 598 aaKnown RBP4.85□□□□□ -1.63
CLK4-207ENST00000520909 PLAUP00749 431 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 KITP10721 976 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 NCLP19338 710 aaKnown RBP4.85□□□□□ -1.63
CLK4-207ENST00000520909 HTR1BP28222 390 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 ALDH7A1P49419 539 aaKnown RBP4.85□□□□□ -1.63
CLK4-207ENST00000520909 ASIC2Q16515 512 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 IFIT1BQ5T764 474 aaKnown RBP4.85□□□□□ -1.63
CLK4-207ENST00000520909 SULT6B1Q6IMI4 303 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 ZDHHC24Q6UX98 284 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 FAM57BQ71RH2 274 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 NGEFQ8N5V2 710 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 PNPLA1Q8N8W4 532 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 FAM71DQ8N9W8 422 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 SPSB4Q96A44 273 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 LRRC59Q96AG4 307 aaKnown RBP4.85□□□□□ -1.63
CLK4-207ENST00000520909 KAZALD1Q96I82 304 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 ZNF479Q96JC4 524 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 VPS50Q96JG6 964 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 PLEKHF1Q96S99 279 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 MEIS3Q99687 375 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 NUAK2Q9H093 628 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 SMURF2Q9HAU4 748 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 ARL8BQ9NVJ2 186 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 MDFICQ9P1T7 246 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 FZD4Q9ULV1 537 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 KIF24Q5T7B8 1368 aa4.85□□□□□ -1.63
CLK4-207ENST00000520909 MAP2P11137 1827 aaKnown RBP4.84□□□□□ -1.63
CLK4-207ENST00000520909 LOC102723971A0A1B0GUV8 181 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 C2CD4BA6NLJ0 364 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 A8MVJ9 347 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 IGSF3O75054 1194 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 HGFP14210 728 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 MCM5P33992 734 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 TMPOP42166 694 aaKnown RBP4.84□□□□□ -1.63
CLK4-207ENST00000520909 PGDP52209 483 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 PGGT1BP53609 377 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 GPC5P78333 572 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 KPNB1Q14974 876 aaKnown RBP4.84□□□□□ -1.63
CLK4-207ENST00000520909 PDXDC1Q6P996 788 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 KCTD20Q7Z5Y7 419 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 DENND1CQ8IV53 801 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 CHPFQ8IZ52 775 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 DIS3LQ8TF46 1054 aaKnown RBP4.84□□□□□ -1.63
CLK4-207ENST00000520909 TRMT61AQ96FX7 289 aaKnown RBP4.84□□□□□ -1.63
CLK4-207ENST00000520909 NT5C1BQ96P26 610 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 TM2D2Q9BX73 214 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 PRDM11Q9NQV5 511 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 SELENONQ9NZV5 590 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 ASAP1Q9ULH1 1129 aa4.84□□□□□ -1.63
CLK4-207ENST00000520909 RTL1A6NKG5 1358 aa4.84□□□□□ -1.64
CLK4-207ENST00000520909 KIAA0232Q92628 1395 aa4.84□□□□□ -1.64
CLK4-207ENST00000520909 NFAT5O94916 1531 aa4.84□□□□□ -1.64
CLK4-207ENST00000520909 H3BML4 177 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 MARCH6O60337 910 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 NDUFB8O95169 186 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 PF4V1P10720 104 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 ADRA1DP25100 572 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 RIPK4P57078 832 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 DEUP1Q05D60 604 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 ZNF267Q14586 743 aaPredicted RBP4.83□□□□□ -1.64
CLK4-207ENST00000520909 ASB5Q8WWX0 329 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 JPH3Q8WXH2 748 aaPredicted RBP4.83□□□□□ -1.64
CLK4-207ENST00000520909 TUBB6Q9BUF5 446 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 IP6K2Q9UHH9 426 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 COG5Q9UP83 839 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 TRPM3Q9HCF6 1732 aaPredicted RBP4.83□□□□□ -1.64
CLK4-207ENST00000520909 SLIT3O75094 1523 aa4.83□□□□□ -1.64
CLK4-207ENST00000520909 IGSF1Q8N6C5 1336 aa4.82□□□□□ -1.64
CLK4-207ENST00000520909 PEAK1Q9H792 1746 aa4.82□□□□□ -1.64
CLK4-207ENST00000520909 MED1Q15648 1581 aaPredicted RBP4.82□□□□□ -1.64
CLK4-207ENST00000520909 H7C4K7 107 aa4.82□□□□□ -1.64
CLK4-207ENST00000520909 CCP110O43303 1012 aa4.82□□□□□ -1.64
CLK4-207ENST00000520909 ZC3H11AO75152 810 aaKnown RBP eCLIP4.82□□□□□ -1.64
CLK4-207ENST00000520909 UBXN7O94888 489 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms