RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 TSHRP16473 764 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 ATP2A2P16615 1042 aaKnown RBP27.81■■■□□ 2.04
COL13A1-212ENST00000520133 GUCY1A3Q02108 690 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 AP1B1Q10567 949 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 PRKD1Q15139 912 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-212ENST00000520133 MSS51Q4VC12 460 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 TTC19Q6DKK2 380 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-212ENST00000520133 ATAD1Q8NBU5 361 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 LGMNQ99538 433 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 TTPALQ9BTX7 342 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 ARHGEF38Q9NXL2 777 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 TBX21Q9UL17 535 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 ZMYND8Q9ULU4 1186 aaPredicted RBP27.81■■■□□ 2.04
COL13A1-212ENST00000520133 A0A1W2PQH9 124 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 CCR1P32246 355 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 SERPINB6P35237 376 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 ALDH7A1P49419 539 aaKnown RBP27.81■■■□□ 2.04
COL13A1-212ENST00000520133 CBLBQ13191 982 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 PALM2Q8IXS6 379 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 CCNYQ8ND76 341 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 FBXO36Q8NEA4 188 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 LGALS13Q9UHV8 139 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 ATP11BQ9Y2G3 1177 aa27.81■■■□□ 2.04
COL13A1-212ENST00000520133 A0A0A0MRY4 1105 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 BANF1O75531 89 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 UPP2O95045 317 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 AMHP03971 560 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 APRTP07741 180 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 VAV1P15498 845 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 GPR15P49685 360 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 RTP2Q5QGT7 225 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 SDHAF4Q5VUM1 108 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 C2orf15Q8WU43 125 aaKnown RBP27.8■■■□□ 2.04
COL13A1-212ENST00000520133 SPATA13Q96N96 652 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 SERPINB11Q96P15 392 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 HAPLN3Q96S86 360 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 PRDM12Q9H4Q4 367 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 NMUR1Q9HB89 426 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 TMEM39AQ9NV64 488 aa27.8■■■□□ 2.04
COL13A1-212ENST00000520133 TBC1D4O60343 1298 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 RTN3O95197 1032 aaPredicted RBP27.79■■■□□ 2.04
COL13A1-212ENST00000520133 EPHB2P29323 1055 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 PBX3P40426 434 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 MMP13P45452 471 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 PPP2R5DQ14738 602 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 CCDC38Q502W7 563 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.79■■■□□ 2.04
COL13A1-212ENST00000520133 MCUQ8NE86 351 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 CASP10Q92851 521 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 BRD8Q9H0E9 1235 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 NUP205Q92621 2012 aa27.79■■■□□ 2.04
COL13A1-212ENST00000520133 MTMR11A4FU01 709 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 ERICH4A6NGS2 130 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 OPHN1O60890 802 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 LRIG2O94898 1065 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 TPSB2P20231 275 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 RFC2P35250 354 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 FDFT1P37268 417 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 TPSAB1Q15661 275 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 ANKRD20A2Q5SQ80 823 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 FAXCQ5TGI0 409 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 ANKRD20A1Q5TYW2 823 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 ANKRD20A3Q5VUR7 823 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 CAPN12Q6ZSI9 719 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 DENND5BQ6ZUT9 1274 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 ARHGEF2Q92974 986 aaKnown RBP27.78■■■□□ 2.04
COL13A1-212ENST00000520133 P2RY11Q96G91 374 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 ZNF333Q96JL9 665 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 IL37Q9NZH6 218 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 SFMBT1Q9UHJ3 866 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 CLUHO75153 1309 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 METTL18O95568 372 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 MX2P20592 715 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 HTR7P34969 479 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 TMEM173Q86WV6 379 aaPredicted RBP27.78■■■□□ 2.04
COL13A1-212ENST00000520133 TDRPQ86YL5 185 aa27.78■■■□□ 2.04
COL13A1-212ENST00000520133 YWHAQP27348 245 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 LSP1P33241 339 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 GPX6P59796 221 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 SEMA5AQ13591 1074 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 MGAT5BQ3V5L5 792 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 SYCP2LQ5T4T6 812 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 C3orf62Q6ZUJ4 267 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 EXOC3L1Q86VI1 746 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 DIS3LQ8TF46 1054 aaKnown RBP27.77■■■□□ 2.04
COL13A1-212ENST00000520133 SELENOSQ9BQE4 189 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 CTNNAL1Q9UBT7 734 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 GREB1Q4ZG55 1949 aa27.77■■■□□ 2.04
COL13A1-212ENST00000520133 RNF103O00237 685 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 PGFP49763 221 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 MSANTD2Q6P1R3 559 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 LRRC31Q6UY01 552 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 SPATA17Q96L03 361 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 COMMD8Q9NX08 183 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 FETUBQ9UGM5 382 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 CHMP2BQ9UQN3 213 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 SNX10Q9Y5X0 201 aa27.76■■■□□ 2.04
COL13A1-212ENST00000520133 FAM92AA1XBS5 289 aa27.76■■■□□ 2.03
COL13A1-212ENST00000520133 SRRM3A6NNA2 597 aaPredicted RBP27.76■■■□□ 2.03
COL13A1-212ENST00000520133 SPAG6O75602 509 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms