RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PEX12O00623 359 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 TULP3O75386 442 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 HOXA5P20719 270 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 CHMP24386 653 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 DIO1P49895 249 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 JAK3P52333 1124 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 CAMK1Q14012 370 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 KCTD2Q14681 263 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 PRICKLE4Q2TBC4 344 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 TTLL5Q6EMB2 1281 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 TMEM88Q6PEY1 159 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 RNF207Q6ZRF8 634 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 GALNT4Q8N4A0 578 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 C12orf76Q8N812 135 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 LSM14AQ8ND56 463 aaKnown RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 ABHD11Q8NFV4 315 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 ZCCHC10Q8TBK6 192 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 CACTINQ8WUQ7 758 aaKnown RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 STAMQ92783 540 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 MASTLQ96GX5 879 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 SNX18Q96RF0 628 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 CHCHD6Q9BRQ6 235 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 PHF7Q9BWX1 381 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 FSD1LQ9BXM9 530 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 ARHGAP39Q9C0H5 1083 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 STN1Q9H668 368 aaKnown RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 DUSP22Q9NRW4 184 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 PPP1R14DQ9NXH3 145 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 DLL3Q9NYJ7 618 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 ANKFY1Q9P2R3 1169 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 ORC3Q9UBD5 711 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 CD207Q9UJ71 328 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 LAS1LQ9Y4W2 734 aaKnown RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 ENTPD2Q9Y5L3 495 aa5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 COPG1Q9Y678 874 aaKnown RBP5.88□□□□□ -1.47
HMGB1P46-201ENST00000520062 CCDC151A5D8V7 595 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 TIMM44O43615 452 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 DHX16O60231 1041 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 USO1O60763 962 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 ZBED4O75132 1171 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 F9P00740 461 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 MBPP02686 304 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 NPSP0C0P6 89 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 NR2F6P10588 404 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 ITPKBP27987 946 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 GPC5P78333 572 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 RPP30P78346 268 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 RAE1P78406 368 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 PLP2Q04941 152 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 GOLGA8FQ08AF8 430 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 LRRC24Q50LG9 513 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 INO80CQ6PI98 192 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 FASTKD5Q7L8L6 764 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 CCDC89Q8N998 374 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 SRFBP1Q8NEF9 429 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 ZMIZ2Q8NF64 920 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 EDC3Q96F86 508 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 PRR11Q96HE9 360 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 APOPT1Q96IL0 206 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 C8orf49Q96NF6 230 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 THAP7Q9BT49 309 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 C1QTNF3Q9BXJ4 246 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 ABHD10Q9NUJ1 306 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 GAR1Q9NY12 217 aaKnown RBP5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 RAPGEFL1Q9UHV5 662 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 RABGAP1Q9Y3P9 1069 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 TSC22D4Q9Y3Q8 395 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 MAST3O60307 1309 aa5.87□□□□□ -1.47
HMGB1P46-201ENST00000520062 GOLGA6L10A0A0M3HER8 536 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 GRM8O00222 908 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SPTLC2O15270 562 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 PRAMEF2O60811 474 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 METTL18O95568 372 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 C1RP00736 705 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 WEE2P0C1S8 567 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 GALNSP34059 522 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 ARL1P40616 181 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 CCR9P51686 369 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 PSG6Q00889 435 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 CFHR3Q02985 330 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 LMAN2Q12907 356 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SEC23BQ15437 767 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 TSTQ16762 297 aaKnown RBP5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 ERCC6LQ2NKX8 1250 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SPDYAQ5MJ70 313 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 KAZNQ674X7 775 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 Q6ZNX1 250 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 TMTC3Q6ZXV5 915 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 MRGPREQ86SM8 312 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 PALM2Q8IXS6 379 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 LAS2Q8IYD9 372 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 LINC01465Q8N7H1 131 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 ENDOVQ8N8Q3 282 aaKnown RBP5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 ANKRD52Q8NB46 1076 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 ADPRHL1Q8NDY3 354 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 NFKBIDQ8NI38 313 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 PROKR1Q8TCW9 393 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms