RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 ZNF557Q8N988 423 aaPredicted RBP23.43■■□□□ 1.34
SKP1-206ENST00000519321 PANX2Q96RD6 677 aa23.43■■□□□ 1.34
SKP1-206ENST00000519321 CHP1Q99653 195 aa23.43■■□□□ 1.34
SKP1-206ENST00000519321 SLC2A11Q9BYW1 496 aa23.43■■□□□ 1.34
SKP1-206ENST00000519321 LMAN1LQ9HAT1 526 aa23.43■■□□□ 1.34
SKP1-206ENST00000519321 ARHGEF38Q9NXL2 777 aa23.43■■□□□ 1.34
SKP1-206ENST00000519321 MTF2Q9Y483 593 aaPredicted RBP23.43■■□□□ 1.34
SKP1-206ENST00000519321 MIA3Q5JRA6 1907 aa23.43■■□□□ 1.34
SKP1-206ENST00000519321 GFRA2O00451 464 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 PI15O43692 258 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 TULP3O75386 442 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 APODP05090 189 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 CHRNB1P11230 501 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 TFE3P19532 575 aaPredicted RBP23.42■■□□□ 1.34
SKP1-206ENST00000519321 GRIA2P42262 883 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 RPL7AP62424 266 aaKnown RBP23.42■■□□□ 1.34
SKP1-206ENST00000519321 CCINQ13939 588 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 NADSYN1Q6IA69 706 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 FSTL4Q6MZW2 842 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 CHSY1Q86X52 802 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 NAT16Q8N8M0 369 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 TMEM105Q8N8V8 129 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 HJURPQ8NCD3 748 aaPredicted RBP23.42■■□□□ 1.34
SKP1-206ENST00000519321 CENPIQ92674 756 aaPredicted RBP23.42■■□□□ 1.34
SKP1-206ENST00000519321 CNPY3Q9BT09 278 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 TKTL2Q9H0I9 626 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 DNAJC17Q9NVM6 304 aaKnown RBP23.42■■□□□ 1.34
SKP1-206ENST00000519321 CALCOCO1Q9P1Z2 691 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 NENFQ9UMX5 172 aa23.42■■□□□ 1.34
SKP1-206ENST00000519321 MYOFQ9NZM1 2061 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 F5H5T6 163 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 TSPAN3O60637 253 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 DCNP07585 359 aaKnown RBP23.41■■□□□ 1.34
SKP1-206ENST00000519321 SLC6A4P31645 630 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 SLC6A11P48066 632 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 FZD5Q13467 585 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 CDO1Q16878 200 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 ARL13BQ3SXY8 428 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 MS4A13Q5J8X5 152 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 PIK3R6Q5UE93 754 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 GRAMD4Q6IC98 578 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 C12orf40Q86WS4 652 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 FNIP1Q8TF40 1166 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 ADAM33Q9BZ11 813 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 ARHGEF4Q9NR80 690 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 MYO1AQ9UBC5 1043 aa23.41■■□□□ 1.34
SKP1-206ENST00000519321 A0A0A0MRY4 1105 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 GOLGA6L7A0A1B0GV03 622 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 ATMINO43313 823 aaPredicted RBP23.4■■□□□ 1.34
SKP1-206ENST00000519321 KAT7O95251 611 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 TACR2P21452 398 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 DGKGP49619 791 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 C15orf59Q2T9L4 293 aaPredicted RBP23.4■■□□□ 1.34
SKP1-206ENST00000519321 RAP1GAP2Q684P5 730 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 RFWD3Q6PCD5 774 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 DNAAF5Q86Y56 855 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 CCDC117Q8IWD4 279 aaPredicted RBP23.4■■□□□ 1.34
SKP1-206ENST00000519321 FAM172AQ8WUF8 416 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 BHMTQ93088 406 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 NCAPGQ9BPX3 1015 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 FBRSL1Q9HCM7 1045 aaKnown RBP23.4■■□□□ 1.34
SKP1-206ENST00000519321 PLK2Q9NYY3 685 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 DLGAP2Q9P1A6 1054 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 XPO7Q9UIA9 1087 aaKnown RBP23.4■■□□□ 1.34
SKP1-206ENST00000519321 FBXO10Q9UK96 956 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 TRIOO75962 3097 aa23.4■■□□□ 1.34
SKP1-206ENST00000519321 TMEM191CA6NGB0 347 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 PAGE1O75459 146 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 EGFP01133 1207 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 TNFRSF4P43489 277 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 GALCP54803 685 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 RABGAP1LQ5R372 815 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 C10orf76Q5T2E6 689 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 TTC39BQ5VTQ0 682 aaPredicted RBP23.39■■□□□ 1.33
SKP1-206ENST00000519321 NAIF1Q69YI7 327 aaPredicted RBP23.39■■□□□ 1.33
SKP1-206ENST00000519321 FAM131BQ86XD5 332 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 CCDC170Q8IYT3 715 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 LGI2Q8N0V4 545 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 CTNNBL1Q8WYA6 563 aaPredicted RBP23.39■■□□□ 1.33
SKP1-206ENST00000519321 C1orf74Q96LT6 269 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 HAPLN3Q96S86 360 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 PRRX2Q99811 253 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 PRMT1Q99873 361 aaKnown RBP23.39■■□□□ 1.33
SKP1-206ENST00000519321 THAP2Q9H0W7 228 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 CHRDQ9H2X0 955 aa23.39■■□□□ 1.33
SKP1-206ENST00000519321 KIAA1549LQ6ZVL6 1849 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 GOLGA6L3A6NEY3 463 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 CCP110O43303 1012 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 CYP1A2P05177 515 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 H2AFZP0C0S5 128 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 PSMA2P25787 234 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 HOXD9P28356 352 aaPredicted RBP23.38■■□□□ 1.33
SKP1-206ENST00000519321 ATXN1P54253 815 aaKnown RBP23.38■■□□□ 1.33
SKP1-206ENST00000519321 KDSRQ06136 332 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 H2AFVQ71UI9 128 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 TMTC1Q8IUR5 882 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 TERB1Q8NA31 727 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 SLC27A6Q9Y2P4 619 aa23.38■■□□□ 1.33
SKP1-206ENST00000519321 TBC1D3BA6NDS4 549 aa23.37■■□□□ 1.33
SKP1-206ENST00000519321 TBL1XO60907 577 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms