RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 DDX47Q9H0S4 455 aaKnown RBP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 OSBPL2Q9H1P3 480 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 NSUN3Q9H649 340 aaKnown RBP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 PRDM6Q9NQX0 595 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 CWC15Q9P013 229 aaKnown RBP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 THEGQ9P2T0 379 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 DNMT3BQ9UBC3 853 aaKnown RBP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 NEU3Q9UQ49 428 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 MTCH2Q9Y6C9 303 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 V9GYY5 206 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-203ENST00000517921 CUL9Q8IWT3 2517 aa10.95□□□□□ -0.66
PABPC1-203ENST00000517921 ANKRD36A6QL64 1941 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 A0A1W2PRU2 124 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 EEF2KO00418 725 aaKnown RBP10.94□□□□□ -0.66
PABPC1-203ENST00000517921 CTIFO43310 598 aaKnown RBP10.94□□□□□ -0.66
PABPC1-203ENST00000517921 CREB3O43889 395 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 MOSPD3O75425 235 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 LRIG2O94898 1065 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 FGF19O95750 216 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 GLP2RO95838 553 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 GJA1P17302 382 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 PTPN2P17706 415 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ARL4AP40617 200 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ZNF135P52742 658 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-203ENST00000517921 DYNLT1P63172 113 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 NTHL1P78549 312 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 TFDP2Q14188 446 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 SLC5A9Q2M3M2 681 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 PRSS36Q5K4E3 855 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 STXBP5Q5T5C0 1151 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 NUGGCQ68CJ6 796 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 TXNDC8Q6A555 127 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 SLC9A4Q6AI14 798 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 KLHL7Q8IXQ5 586 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 PLD5Q8N7P1 536 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ATP6V0D2Q8N8Y2 350 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 LEMD2Q8NC56 503 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 C1orf54Q8WWF1 131 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ATXN2LQ8WWM7 1075 aaKnown RBP10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ATG4AQ8WYN0 398 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 PPP2R3CQ969Q6 453 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 TCEAL4Q96EI5 215 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 KRT12Q99456 494 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 EPAS1Q99814 870 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 KLF16Q9BXK1 252 aaPredicted RBP10.94□□□□□ -0.66
PABPC1-203ENST00000517921 NACA2Q9H009 215 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ATXN3LQ9H3M9 355 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 SFXN1Q9H9B4 322 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 TRPC7Q9HCX4 862 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 ARHGEF4Q9NR80 690 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 HS3ST4Q9Y661 456 aa10.94□□□□□ -0.66
PABPC1-203ENST00000517921 A0A0C4DFX4 3053 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 CLUHO75153 1309 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 UQCRHLA0A096LP55 91 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 TRAV19A0A0A6YYK7 116 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 CCDC195A0A1B0GUA6 201 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 APOC4-APOC2K7ER74 178 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 APOL1O14791 398 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 DCLK1O15075 740 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 STC2O76061 302 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 APOC2P02655 101 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 UQCRHP07919 91 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 MBL2P11226 248 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 PECAM1P16284 738 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 PFKLP17858 780 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 POU3F3P20264 500 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 AMPD1P23109 780 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 HOXC13P31276 330 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 CHRNA3P32297 505 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 HTR7P34969 479 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 HCAR3P49019 387 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 FNTAP49354 379 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 KCNQ1P51787 676 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 TERF1P54274 439 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 TPI1P60174 286 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 SLC7A9P82251 487 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 COG7P83436 770 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 HYAL1Q12794 435 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 NAA30Q147X3 362 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 NOMO1Q15155 1222 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 CCNG2Q16589 344 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 TCEAL5Q5H9L2 206 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 MS4A13Q5J8X5 152 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 NCBP2-AS2Q69YL0 99 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 TTC27Q6P3X3 843 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 RFX8Q6ZV50 586 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 PDZD4Q76G19 769 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 C14orf80Q86SX3 495 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 UNC45BQ8IWX7 931 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 ZNF683Q8IZ20 524 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 C12orf76Q8N812 135 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 ARL14EPQ8N8R7 260 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 MAB21L3Q8N8X9 362 aa10.93□□□□□ -0.66
PABPC1-203ENST00000517921 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-203ENST00000517921 WBP2Q969T9 261 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms