RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ADGRG2Q8IZP9 1017 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 CCAR2Q8N163 923 aaKnown RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 KIAA1958Q8N8K9 716 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 TTC16Q8NEE8 873 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 KIAA1524Q8TCG1 905 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 OSCP1Q8WVF1 389 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 NTAN1Q96AB6 310 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 PRICKLE1Q96MT3 831 aaPredicted RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 SNRNP25Q9BV90 132 aaKnown RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 WDCPQ9H6R7 721 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 PCSK1NQ9UHG2 260 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 USP18Q9UMW8 372 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 GUCA1BQ9UMX6 200 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 SH3BP1Q9Y3L3 701 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 MUC3AQ02505 3323 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 NRDCO43847 1150 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 PALMO75781 387 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 LATS1O95835 1130 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 RARAP10276 462 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 PSMC3P17980 439 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 GDI1P31150 447 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 MLLT6P55198 1093 aaPredicted RBP10.24□□□□□ -0.77
CLN8-202ENST00000517514 SMTNL2Q2TAL5 461 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 C5orf22Q49AR2 442 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 KCNT1Q5JUK3 1230 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 RAP1GAP2Q684P5 730 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 SCYL2Q6P3W7 929 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 RHBDF2Q6PJF5 856 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 ANKS1BQ7Z6G8 1248 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 NT5DC3Q86UY8 548 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 TMEM25Q86YD3 366 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLN8-202ENST00000517514 UNC45BQ8IWX7 931 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 CPXM2Q8N436 756 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 RNF10Q8N5U6 811 aaKnown RBP10.24□□□□□ -0.77
CLN8-202ENST00000517514 FAM71BQ8TC56 605 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 DEPDC1BQ8WUY9 529 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 KRT35Q92764 455 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 IGSF8Q969P0 613 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 BTN2A3PQ96KV6 586 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 HAPLN3Q96S86 360 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 KCTD15Q96SI1 283 aaPredicted RBP10.24□□□□□ -0.77
CLN8-202ENST00000517514 TSGA10Q9BZW7 698 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 DCLK3Q9C098 648 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 OSBPL2Q9H1P3 480 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 DUS2Q9NX74 493 aaKnown RBP10.24□□□□□ -0.77
CLN8-202ENST00000517514 IGSF9Q9P2J2 1179 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 ZNF212Q9UDV6 495 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 CLEC4EQ9ULY5 219 aa10.24□□□□□ -0.77
CLN8-202ENST00000517514 BDP1A6H8Y1 2624 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 NUP205Q92621 2012 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 IGLV3-10A0A075B6K4 115 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 C3orf70A6NLC5 250 aaPredicted RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 FANCGO15287 622 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 CHADO15335 359 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 KRT86O43790 486 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 TSPAN3O60637 253 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 RNF8O76064 485 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 FTCDO95954 541 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 APOEP02649 317 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 CYP17A1P05093 508 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 CD48P09326 243 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 SLC2A3P11169 496 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 TACR2P21452 398 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 IL4RP24394 825 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 L1CAMP32004 1257 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 HARS2P49590 506 aaKnown RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 RPS24P62847 133 aaKnown RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 NRG1Q02297 640 aaPredicted RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 MESP2Q0VG99 397 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 AUHQ13825 339 aaKnown RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 DHCR24Q15392 516 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 ARHGAP29Q52LW3 1261 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 HS1BP3Q53T59 392 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 LY6G5CQ5SRR4 150 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 ADGRF1Q5T601 910 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 ERMARDQ5T6L9 678 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 FYB2Q5VWT5 728 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 NAIF1Q69YI7 327 aaPredicted RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 FBXL22Q6P050 247 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 C12orf40Q86WS4 652 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 RNF135Q8IUD6 432 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 ATP6V0D2Q8N8Y2 350 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 WFDC5Q8TCV5 224 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 TSC1Q92574 1164 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 RNF34Q969K3 372 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 NXPE3Q969Y0 559 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 C1orf74Q96LT6 269 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 TRMT61BQ9BVS5 477 aaKnown RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 SIK2Q9H0K1 926 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 EBF3Q9H4W6 596 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 KLHL11Q9NVR0 708 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 GTSE1Q9NYZ3 720 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 LSM7Q9UK45 103 aaKnown RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 AP4E1Q9UPM8 1137 aa10.23□□□□□ -0.77
CLN8-202ENST00000517514 NYNRINQ9P2P1 1898 aaKnown RBP10.23□□□□□ -0.77
CLN8-202ENST00000517514 DRGXA6NNA5 263 aa10.22□□□□□ -0.77
CLN8-202ENST00000517514 DDX3YO15523 660 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms