RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 RPL6Q02878 288 aaKnown RBP18.38■□□□□ 0.53
SFXN1-212ENST00000515791 PDCLQ13371 301 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 TAF5Q15542 800 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 PTPRNQ16849 979 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 IL31Q6EBC2 164 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 SLC23A3Q6PIS1 610 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 TAC4Q86UU9 113 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 DEFB119Q8N690 84 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 UCMAQ8WVF2 138 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 ZNF419Q96HQ0 510 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-212ENST00000515791 SERPINB11Q96P15 392 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 ITM2CQ9NQX7 267 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 USP36Q9P275 1121 aaKnown RBP18.38■□□□□ 0.53
SFXN1-212ENST00000515791 PCDHGC3Q9UN70 934 aa18.38■□□□□ 0.53
SFXN1-212ENST00000515791 PCDH15Q96QU1 1955 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 C4orf47A7E2U8 309 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 IRAK2O43187 625 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 SART1O43290 800 aaKnown RBP18.37■□□□□ 0.53
SFXN1-212ENST00000515791 CD70P32970 193 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
SFXN1-212ENST00000515791 ZNF33AQ06730 810 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 KCNMA1Q12791 1236 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 LYSMD4Q5XG99 296 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 ADAM32Q8TC27 787 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 DDX1Q92499 740 aaKnown RBP18.37■□□□□ 0.53
SFXN1-212ENST00000515791 GOLGA1Q92805 767 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 CPXM1Q96SM3 734 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 CIPCQ9C0C6 399 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 NDST4Q9H3R1 872 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 ABCB8Q9NUT2 735 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 XPO7Q9UIA9 1087 aaKnown RBP18.37■□□□□ 0.53
SFXN1-212ENST00000515791 GGA2Q9UJY4 613 aa18.37■□□□□ 0.53
SFXN1-212ENST00000515791 ATXN2Q99700 1313 aaKnown RBP18.37■□□□□ 0.53
SFXN1-212ENST00000515791 FOXN3O00409 490 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 TBL1XO60907 577 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 IGLV3-19P01714 112 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 PNMA6AP0CW24 399 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 HOXD12P35452 270 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 SLC11A2P49281 568 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 CAMK2GQ13555 558 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 TRIM61Q5EBN2 209 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 CHST9Q7L1S5 443 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 WFIKKN2Q8TEU8 576 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 FAM149B1Q96BN6 582 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 MYO19Q96H55 970 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 TUBGCP2Q9BSJ2 902 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 NUP62CLQ9H1M0 184 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 LHX5Q9H2C1 402 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 PRDM16Q9HAZ2 1276 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 POPDC2Q9HBU9 364 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 WSB2Q9NYS7 404 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 DNAJC12Q9UKB3 198 aa18.36■□□□□ 0.53
SFXN1-212ENST00000515791 INTS6Q9UL03 887 aaKnown RBP18.36■□□□□ 0.53
SFXN1-212ENST00000515791 PABPC1P11940 636 aaKnown RBP18.35■□□□□ 0.53
SFXN1-212ENST00000515791 HLA-EP13747 358 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 RPS24P62847 133 aaKnown RBP18.35■□□□□ 0.53
SFXN1-212ENST00000515791 YWHAZP63104 245 aaKnown RBP18.35■□□□□ 0.53
SFXN1-212ENST00000515791 STARD3Q14849 445 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 HSP90AA4PQ58FG1 418 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 MS4A13Q5J8X5 152 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 KIAA1324Q6UXG2 1013 aaKnown RBP18.35■□□□□ 0.53
SFXN1-212ENST00000515791 TMPRSS6Q8IU80 811 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 FAM71AQ8IYT1 594 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 AHI1Q8N157 1196 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 CYB5D2Q8WUJ1 264 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 SLC2A13Q96QE2 648 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 NAA15Q9BXJ9 866 aaKnown RBP18.35■□□□□ 0.53
SFXN1-212ENST00000515791 CAPN10Q9HC96 672 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 GON4LQ3T8J9 2241 aa18.35■□□□□ 0.53
SFXN1-212ENST00000515791 CNOT1A5YKK6 2376 aaKnown RBP18.34■□□□□ 0.53
SFXN1-212ENST00000515791 PI4KAP42356 2102 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 KCNK5O95279 499 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
SFXN1-212ENST00000515791 EPHX1P07099 455 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 USP8P40818 1118 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 DPP6P42658 865 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 TPMTP51580 245 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 E2F5Q15329 346 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 FSCBQ5H9T9 825 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 CT47A1Q5JQC4 288 aaPredicted RBP18.34■□□□□ 0.53
SFXN1-212ENST00000515791 N4BP2L1Q5TBK1 243 aaPredicted RBP18.34■□□□□ 0.53
SFXN1-212ENST00000515791 MBLAC2Q68D91 279 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 RBM43Q6ZSC3 357 aaKnown RBP18.34■□□□□ 0.53
SFXN1-212ENST00000515791 SLC47A2Q86VL8 602 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 PASD1Q8IV76 773 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 TTC17Q96AE7 1141 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 HSPA12BQ96MM6 686 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 PRMT1Q99873 361 aaKnown RBP18.34■□□□□ 0.53
SFXN1-212ENST00000515791 TMEM9BQ9NQ34 198 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 FSCN3Q9NQT6 498 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 ASNSD1Q9NWL6 643 aa18.34■□□□□ 0.53
SFXN1-212ENST00000515791 ADAMTS9Q9P2N4 1935 aa18.33■□□□□ 0.53
SFXN1-212ENST00000515791 KCNU1A8MYU2 1149 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms