RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 CCR1P32246 355 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 ARPP19P56211 112 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 DEFB103AP81534 67 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 NRG1Q02297 640 aaPredicted RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 DSG1Q02413 1049 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 IFFO1Q0D2I5 559 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 EIF4EBP2Q13542 120 aaPredicted RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 PDK1Q15118 436 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 DDR2Q16832 855 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 SCD5Q86SK9 330 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 TADA2BQ86TJ2 420 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 ZC3H18Q86VM9 953 aaKnown RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 TMEM173Q86WV6 379 aaPredicted RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 ATAD1Q8NBU5 361 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 PDZD8Q8NEN9 1154 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 ADAM32Q8TC27 787 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 OVCA2Q8WZ82 227 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 OLFM3Q96PB7 478 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 TKTL2Q9H0I9 626 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.35□□□□□ -0.43
LMNA-224ENST00000515711 SPG21Q9NZD8 308 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 PRKAG2Q9UGJ0 569 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 AFF4Q9UHB7 1163 aaKnown RBP12.35□□□□□ -0.43
LMNA-224ENST00000515711 MAFFQ9ULX9 164 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 CDY1Q9Y6F8 540 aa12.35□□□□□ -0.43
LMNA-224ENST00000515711 A0A1W2PQH9 124 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 HMGB1P1B2RPK0 211 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 DCLK1O15075 740 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 CHADO15335 359 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 FGF10O15520 208 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 KCNN4O15554 427 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 MTSS1O43312 755 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 RIPK2O43353 540 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 CREB3O43889 395 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 URODP06132 367 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 MYZAPP0CAP1 466 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 MX2P20592 715 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 AMPD1P23109 780 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 RPL22P35268 128 aaKnown RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 PBX3P40426 434 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 CDR1P51861 262 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 KPNA1P52294 538 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 GDF10P55107 478 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 CBX1P83916 185 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 GABPB1Q06547 395 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 PRSS55Q6UWB4 352 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 CENPUQ71F23 418 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 DDX53Q86TM3 631 aaKnown RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 CCDC25Q86WR0 208 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 UNC45BQ8IWX7 931 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 PYROXD2Q8N2H3 581 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 FAM71DQ8N9W8 422 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 TFB1MQ8WVM0 346 aaKnown RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 B3GALT6Q96L58 329 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 YME1L1Q96TA2 773 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 TTLL2Q9BWV7 592 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 KLC2Q9H0B6 622 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 TLR6Q9Y2C9 796 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
LMNA-224ENST00000515711 DOCK4Q8N1I0 1966 aa12.34□□□□□ -0.43
LMNA-224ENST00000515711 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 MFSD11O43934 449 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 APOEP02649 317 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 ABHD2P08910 425 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 ZSCAN5DPP0CG00 497 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 HOXC13P31276 330 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GPR15P49685 360 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 ARL4CP56559 192 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GBE1Q04446 702 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 ZNF33AQ06730 810 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 ZNF844Q08AG5 666 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 PSRC1Q6PGN9 363 aaPredicted RBP12.33□□□□□ -0.44
LMNA-224ENST00000515711 RSPO2Q6UXX9 243 aaPredicted RBP12.33□□□□□ -0.44
LMNA-224ENST00000515711 ZNF276Q8N554 614 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 TTC9BQ8N6N2 239 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GLIS1Q8NBF1 620 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 BADQ92934 168 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 TBC1D31Q96DN5 1066 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 RBM15Q96T37 977 aaKnown RBP eCLIP12.33□□□□□ -0.44
LMNA-224ENST00000515711 TMEM109Q9BVC6 243 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
LMNA-224ENST00000515711 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 NMUR1Q9HB89 426 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 USP29Q9HBJ7 922 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 DONSONQ9NYP3 566 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 GMIPQ9P107 970 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 VPS18Q9P253 973 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms