RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 RNF34Q969K3 372 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 SLC39A13Q96H72 371 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 PRICKLE1Q96MT3 831 aaPredicted RBP11.94□□□□□ -0.5
VCAN-212ENST00000515397 SERPINB11Q96P15 392 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 ADAM33Q9BZ11 813 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 POLMQ9NP87 494 aaPredicted RBP11.94□□□□□ -0.5
VCAN-212ENST00000515397 DDIT4Q9NX09 232 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 ELOVL2Q9NXB9 296 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 STOML2Q9UJZ1 356 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 TLR6Q9Y2C9 796 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 SLC27A6Q9Y2P4 619 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 SNX10Q9Y5X0 201 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 STON1Q9Y6Q2 735 aa11.94□□□□□ -0.5
VCAN-212ENST00000515397 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 LGALS16A8MUM7 142 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 IRAK2O43187 625 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 MAP3K13O43283 966 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 GJB6O95452 261 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 CHRNB2P17787 502 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 CDK17Q00537 523 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 SLC6A3Q01959 620 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 RING1Q06587 406 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 RAP1GAP2Q684P5 730 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 NUGGCQ68CJ6 796 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 ANKS1BQ7Z6G8 1248 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 ERICH1Q86X53 443 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 CIR1Q86X95 450 aaPredicted RBP11.93□□□□□ -0.5
VCAN-212ENST00000515397 CACUL1Q86Y37 369 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 TMEFF1Q8IYR6 380 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 LGI2Q8N0V4 545 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 CARNMT1Q8N4J0 409 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 TMEM35BQ8NCS4 154 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 NEK11Q8NG66 645 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 IPO4Q8TEX9 1081 aaKnown RBP11.93□□□□□ -0.5
VCAN-212ENST00000515397 SLC2A13Q96QE2 648 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 MTG2Q9H4K7 406 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 FAM204AQ9H8W3 233 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 SEMA4GQ9NTN9 838 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 MBD1Q9UIS9 605 aaPredicted RBP11.93□□□□□ -0.5
VCAN-212ENST00000515397 CEP83Q9Y592 693 aa11.93□□□□□ -0.5
VCAN-212ENST00000515397 SYCE3A1L190 88 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 LRRC10BA6NIK2 292 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 NDUFV2P19404 249 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 TACR2P21452 398 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 PRKCHP24723 683 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 SOX5P35711 763 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 ID4P47928 161 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 ATXN1P54253 815 aaKnown RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 JAM2P57087 298 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 CREB5Q02930 508 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 ZNF234Q14588 700 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 HSF5Q4G112 596 aaPredicted RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 FSCBQ5H9T9 825 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 MS4A13Q5J8X5 152 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 TCEAL6Q6IPX3 200 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 KIAA1324Q6UXG2 1013 aaKnown RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 TRMT11Q7Z4G4 463 aaKnown RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 ADIPOR2Q86V24 386 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 CHSY1Q86X52 802 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 ANKRD20A12PQ8NF67 263 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 OLIG1Q8TAK6 271 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 EPS8L1Q8TE68 723 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 TCEAL3Q969E4 200 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 NAP1L5Q96NT1 182 aaPredicted RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 NOX5Q96PH1 765 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 SPAG5Q96R06 1193 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 PCDHB18PQ96TA0 734 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 CD248Q9HCU0 757 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 TMPRSS4Q9NRS4 437 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 RXFP3Q9NSD7 469 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 THAP10Q9P2Z0 257 aaPredicted RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 GGA2Q9UJY4 613 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 NOCTQ9UK39 431 aaKnown RBP11.92□□□□□ -0.5
VCAN-212ENST00000515397 CYP8B1Q9UNU6 501 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 EML5Q05BV3 1969 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 DMXL1Q9Y485 3027 aa11.92□□□□□ -0.5
VCAN-212ENST00000515397 SPAG17Q6Q759 2223 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 KCNU1A8MYU2 1149 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 M0QYT0 321 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 HSF2BPO75031 334 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 LATS1O95835 1130 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 IGLV3-25P01717 112 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 APOEP02649 317 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 PABPC1P11940 636 aaKnown RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 P2RY2P41231 377 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 STAT1P42224 750 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 DHPSP49366 369 aaPredicted RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 ZNF165P49910 485 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 IRAK1P51617 712 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 NOMO3P69849 1222 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 FMO1Q01740 532 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 LMAN2Q12907 356 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 EIF4EBP2Q13542 120 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms