RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SHBQ15464 509 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 MPPE1Q53F39 396 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 ZNF394Q53GI3 561 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 HES3Q5TGS1 186 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 KIAA0895LQ68EN5 471 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 FAM217AQ8IXS0 508 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 LINC00301Q8NCQ3 95 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 GANCQ8TET4 914 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 NDRG1Q92597 394 aaKnown RBP21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 ELF4Q99607 663 aaPredicted RBP21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 EBF2Q9HAK2 575 aa21.23■□□□□ 0.99
SQSTM1-215ENST00000514093 PLXNA2O75051 1894 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 CYSRT1A8MQ03 144 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 SPTLC2O15270 562 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 DFNA5O60443 496 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 ABCB4P21439 1286 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 AFMP43652 599 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 YWHAGP61981 247 aaKnown RBP eCLIP21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 RACK1P63244 317 aaKnown RBP21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 ZBTB16Q05516 673 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 TTC31Q49AM3 519 aaPredicted RBP21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 C1orf220Q5T0J3 134 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 SHC4Q6S5L8 630 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 GOLGA5Q8TBA6 731 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 GGA2Q9UJY4 613 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 TENM4Q6N022 2769 aa21.22■□□□□ 0.99
SQSTM1-215ENST00000514093 CFAP46Q8IYW2 2715 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 WNT9AO14904 365 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 POLR2DO15514 142 aaKnown RBP21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 C7P10643 843 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 ACADVLP49748 655 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 MBLAC2Q68D91 279 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 ZNF776Q68DI1 518 aaPredicted RBP21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 GPR155Q7Z3F1 870 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 GRAMD1CQ8IYS0 662 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 SAP25Q8TEE9 199 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 WFIKKN2Q8TEU8 576 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 PLD4Q96BZ4 506 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 TMA16Q96EY4 203 aaKnown RBP21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 SERGEFQ9UGK8 458 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 MTMR6Q9Y217 621 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 NCKAP1Q9Y2A7 1128 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 ZNF462Q96JM2 2506 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 PTPRQQ9UMZ3 2332 aa21.21■□□□□ 0.99
SQSTM1-215ENST00000514093 A0A1W2PPC4 97 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 PABPC1P11940 636 aaKnown RBP21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 SGSHP51688 502 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 GALCP54803 685 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 CCDC173Q0VFZ6 552 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 RTP5Q14D33 572 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 TRIP4Q15650 581 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 CEP135Q66GS9 1140 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 NCEH1Q6PIU2 408 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 PCSK4Q6UW60 755 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 FMNL3Q8IVF7 1028 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 ARHGAP18Q8N392 663 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 LSM14AQ8ND56 463 aaKnown RBP21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 TMC2Q8TDI7 906 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 BAP1Q92560 729 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 HEXIM2Q96MH2 286 aaKnown RBP21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 NRSN2Q9GZP1 204 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 CYP3A43Q9HB55 503 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 AASDHPPTQ9NRN7 309 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 FBXL12Q9NXK8 326 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 SFMBT1Q9UHJ3 866 aa21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 COL5A1P20908 1838 aaPredicted RBP21.2■□□□□ 0.98
SQSTM1-215ENST00000514093 TP53BP1Q12888 1972 aaPredicted RBP21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 PVALEFA0A1B0GWK0 134 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 CAPN9O14815 690 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 NR3C1P04150 777 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 DLDP09622 509 aaKnown RBP21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 C1SP09871 688 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 CD70P32970 193 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 HARS2P49590 506 aaKnown RBP21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 BNIP3Q12983 259 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 STK4Q13043 487 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 FBXL19Q6PCT2 694 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 PIGZQ86VD9 579 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 SLC9A9Q8IVB4 645 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 AHI1Q8N157 1196 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 WFDC5Q8TCV5 224 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 TAS1R2Q8TE23 839 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 BACH2Q9BYV9 841 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 PABPC3Q9H361 631 aaKnown RBP21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 FBRSQ9HAH7 460 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 SUN2Q9UH99 717 aa21.19■□□□□ 0.98
SQSTM1-215ENST00000514093 MYLKQ15746 1914 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 IKBKBO14920 756 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 BRINP1O60477 761 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 PPP6R2O75170 966 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 GCLMP48507 274 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 TKTL1P51854 596 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 CXADRP78310 365 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 CFHR1Q03591 330 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 KIAA0907Q7Z7F0 614 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.18■□□□□ 0.981e-7■□□□□ 10.8
SQSTM1-215ENST00000514093 KIAA0895Q8NCT3 520 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 SNIP1Q8TAD8 396 aaKnown RBP21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 GOLGA1Q92805 767 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 FGF11Q92914 225 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms