RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HTR4Q13639 388 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 MLF2Q15773 248 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 ZNF852Q6ZMS4 543 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 HOMER1Q86YM7 354 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 ITPRIPQ8IWB1 547 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 FTSJ3Q8IY81 847 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 GPR65Q8IYL9 337 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 RSAD2Q8WXG1 361 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 MAP4K1Q92918 833 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 ARL8AQ96BM9 186 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 MTMR8Q96EF0 704 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 GPATCH3Q96I76 525 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 IGSF21Q96ID5 467 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 FAM193BQ96PV7 902 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 DHRS4Q9BTZ2 278 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 LSM14BQ9BX40 385 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 LRRCC1Q9C099 1032 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 HAPLN2Q9GZV7 340 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 FAM49AQ9H0Q0 323 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 PLEKHA4Q9H4M7 779 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 ZNF768Q9H5H4 540 aaKnown RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 RSAD1Q9HA92 442 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 LTB4R2Q9NPC1 389 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 PRMT8Q9NR22 394 aaPredicted RBP4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 TNNQ9UQP3 1299 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 TRAF6Q9Y4K3 522 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 NAV2Q8IVL1 2488 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 C2orf16Q68DN1 1984 aa4.13□□□□□ -1.75
PDLIM5-218ENST00000513341 DOCK8Q8NF50 2099 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 PIPSLA2A3N6 862 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 CCDC66A2RUB6 948 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 DNAJC9-AS1A6NH13 148 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 RNASET2O00584 256 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 ZBTB5O15062 677 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 DHX16O60231 1041 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 RBMXL2O75526 392 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 FGAP02671 866 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 ALDH2P05091 517 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 PARP1P09874 1014 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 FAM153BP0C7A2 387 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 GOLGA8HP0CJ92 632 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 TDGF1P13385 188 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 HOXB6P17509 224 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 CA8P35219 290 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 CCR3P51677 355 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 NPEPPSP55786 919 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 GPC5P78333 572 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 CDC42EP1Q00587 391 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 FOXI1Q12951 378 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 SIM2Q14190 667 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 UBXN2BQ14CS0 331 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 WTAPQ15007 396 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 ZNF484Q5JVG2 852 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 MTHFD1LQ6UB35 978 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 MFSD6Q6ZSS7 791 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 MTSS1LQ765P7 747 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 IQCA1Q86XH1 822 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 KIAA0319LQ8IZA0 1049 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 LILRB2Q8N423 598 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 OR5AN1Q8NGI8 311 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 IL31RAQ8NI17 732 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 SLC7A14Q8TBB6 771 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 ESR2Q92731 530 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 PHKBQ93100 1093 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 E2F7Q96AV8 911 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 FOXRED1Q96CU9 486 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 DCLRE1CQ96SD1 692 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 SEC62Q99442 399 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 RNF41Q9H4P4 317 aaPredicted RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 AZI2Q9H6S1 392 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 VAT1LQ9HCJ6 419 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 CHST12Q9NRB3 414 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 MRPL17Q9NRX2 175 aaKnown RBP4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 TOMM22Q9NS69 142 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 DACT1Q9NYF0 836 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 NBEAQ8NFP9 2946 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 CLUHO75153 1309 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 FRMPD4Q14CM0 1322 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 ITPR1Q14643 2758 aa4.12□□□□□ -1.75
PDLIM5-218ENST00000513341 IGSF10Q6WRI0 2623 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 DOCK5Q9H7D0 1870 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 GREB1Q4ZG55 1949 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 NT5C1B-RDH14C9J2C7 533 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 KCNAB3O43448 404 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 HBP1O60381 514 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ATP9AO75110 1047 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 PAPSS2O95340 614 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 GALTP07902 379 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 CNPP09543 421 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 CEACAM1P13688 526 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 KCNA2P16389 499 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 KLRC1P26715 233 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 HOXA6P31267 233 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 HOXA13P31271 388 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 CXCR5P32302 372 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 KIR2DL3P43628 341 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 CXCL12P48061 93 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 METAP2P50579 478 aaKnown RBP eCLIP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ANTXR2P58335 489 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 IGBP1P78318 339 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms