RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 NCEH1Q6PIU2 408 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 DENND1CQ8IV53 801 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 CPXM2Q8N436 756 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 CCDC127Q96BQ5 260 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 CGRRF1Q99675 332 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 NEUROG2Q9H2A3 272 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 VRTNQ9H8Y1 702 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 ASCL3Q9NQ33 180 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 PANK4Q9NVE7 773 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 ADAMTS1Q9UHI8 967 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 ZNF510Q9Y2H8 683 aa11.72□□□□□ -0.53
RNF4-218ENST00000513284 TLR4O00206 839 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.53
RNF4-218ENST00000513284 EFSO43281 561 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 DNTTP04053 509 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 IDEP14735 1019 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 HOXD9P28356 352 aaPredicted RBP11.71□□□□□ -0.53
RNF4-218ENST00000513284 ATICP31939 592 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 CASP4P49662 377 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 KIF11P52732 1056 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 SKOR1P84550 965 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 CYP24A1Q07973 514 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 ALCAMQ13740 583 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.53
RNF4-218ENST00000513284 FNDC3BQ53EP0 1204 aaKnown RBP11.71□□□□□ -0.53
RNF4-218ENST00000513284 BROXQ5VW32 411 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 CLEC20AQ6ZU45 233 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 SV2BQ7L1I2 683 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 SLC25A45Q8N413 288 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 MYO19Q96H55 970 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 TNIP3Q96KP6 325 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 RSPH9Q9H1X1 276 aaPredicted RBP11.71□□□□□ -0.53
RNF4-218ENST00000513284 ERVMER34-1Q9H9K5 563 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 GDF3Q9NR23 364 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 FBXL12Q9NXK8 326 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 STK17AQ9UEE5 414 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 USP3Q9Y6I4 520 aa11.71□□□□□ -0.53
RNF4-218ENST00000513284 USP9XQ93008 2570 aaPredicted RBP11.71□□□□□ -0.54
RNF4-218ENST00000513284 A0A087X0B3 334 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 K7ENP7 123 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 SIGLEC6O43699 453 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 VNN1O95497 513 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 GIMD1P0DJR0 217 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 ADORA2BP29275 332 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 LSSP48449 732 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 NDST1P52848 882 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 ERVPABLB-1P60509 514 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 COG7P83436 770 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 E2F1Q01094 437 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 EHHADHQ08426 723 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 TRPC3Q13507 836 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 E2F5Q15329 346 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 INO80CQ6PI98 192 aaPredicted RBP11.7□□□□□ -0.54
RNF4-218ENST00000513284 USP30Q70CQ3 517 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 CHST9Q7L1S5 443 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 PRICKLE2Q7Z3G6 844 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 DDI1Q8WTU0 396 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 KCNE4Q8WWG9 221 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 JAKMIP2Q96AA8 810 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 TWNKQ96RR1 684 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 DPH1Q9BZG8 443 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 DCLK3Q9C098 648 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 PABPC3Q9H361 631 aaKnown RBP11.7□□□□□ -0.54
RNF4-218ENST00000513284 AASDHPPTQ9NRN7 309 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 CLIC5Q9NZA1 410 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 NAGPAQ9UK23 515 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 PLA2G4CQ9UP65 541 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 RELNP78509 3460 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 DOPEY2Q9Y3R5 2298 aa11.7□□□□□ -0.54
RNF4-218ENST00000513284 CLIC2O15247 247 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 YKT6O15498 198 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 USP12O75317 370 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 C4BPAP04003 597 aaKnown RBP11.69□□□□□ -0.54
RNF4-218ENST00000513284 CCR5P51681 352 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 GABREP78334 506 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 NFKB2Q00653 900 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 PDE4CQ08493 712 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 EFEMP1Q12805 493 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 LINC00303Q3SY05 128 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 ZNF776Q68DI1 518 aaPredicted RBP11.69□□□□□ -0.54
RNF4-218ENST00000513284 SCARA5Q6ZMJ2 495 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 EPM2AIP1Q7L775 607 aaPredicted RBP11.69□□□□□ -0.54
RNF4-218ENST00000513284 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF4-218ENST00000513284 ZNF507Q8TCN5 953 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 WFDC5Q8TCV5 224 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
RNF4-218ENST00000513284 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 LMLNQ96KR4 655 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 PANK2Q9BZ23 570 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 FBRSQ9HAH7 460 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 ABCB8Q9NUT2 735 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 ARHGAP20Q9P2F6 1191 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 SUN2Q9UH99 717 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 DACH1Q9UI36 760 aa11.69□□□□□ -0.54
RNF4-218ENST00000513284 RASAL2Q9UJF2 1139 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms