RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 DHPSP49366 369 aaPredicted RBP7.58□□□□□ -1.2
USP46-208ENST00000512656 KDSRQ06136 332 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 LMAN2Q12907 356 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 STK4Q13043 487 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 ST3GAL2Q16842 350 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 GAB4Q2WGN9 574 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 ANO4Q32M45 955 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 ZACNQ401N2 412 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 SPDYCQ5MJ68 293 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 N4BP2L1Q5TBK1 243 aaPredicted RBP7.58□□□□□ -1.2
USP46-208ENST00000512656 CEP135Q66GS9 1140 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 TADA2BQ86TJ2 420 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 ACOT1Q86TX2 421 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 CRYBG2Q8N1P7 616 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 IL17RCQ8NAC3 791 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 CCDC150Q8NCX0 1101 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 MDGA1Q8NFP4 955 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 SCAMP5Q8TAC9 235 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 OLIG1Q8TAK6 271 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 PAGE5Q96GU1 130 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 XPO6Q96QU8 1125 aaKnown RBP7.58□□□□□ -1.2
USP46-208ENST00000512656 KCNK16Q96T55 309 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 GZF1Q9H116 711 aaPredicted RBP7.58□□□□□ -1.2
USP46-208ENST00000512656 SMOC1Q9H4F8 434 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 CSNK1G1Q9HCP0 422 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 TMEM9BQ9NQ34 198 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 KRT82Q9NSB4 513 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 RXFP3Q9NSD7 469 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 TMEM30AQ9NV96 361 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 DMAC2Q9NW81 257 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 WDR35Q9P2L0 1181 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 RCOR1Q9UKL0 485 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 INVSQ9Y283 1065 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 ANAPC1Q9H1A4 1944 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 FAM208BQ5VWN6 2430 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 GON4LQ3T8J9 2241 aa7.58□□□□□ -1.2
USP46-208ENST00000512656 FRYQ5TBA9 3013 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 LNP1A1A4G5 178 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 C4orf47A7E2U8 309 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 SGK1O00141 431 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 SCAMP3O14828 347 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 MAPK13O15264 365 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 KLRC4O43908 158 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 TLR5O60602 858 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 TULP3O75386 442 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 ASS1P00966 412 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 ZDHHC11BP0C7U3 371 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 IRF1P10914 325 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 KRT13P13646 458 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 CCDC130P13994 396 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 PCSK2P16519 638 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 CMA1P23946 247 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 RPL13P26373 211 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 PMLP29590 882 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 HOXD12P35452 270 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 ATP5C1P36542 298 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 P2RY2P41231 377 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 PIK3CAP42336 1068 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 KIR2DL1P43626 348 aaPredicted RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 NOVA1P51513 510 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 VAMP7P51809 220 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 NDST1P52848 882 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 MAP3K7CLP57077 242 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 SHC2P98077 582 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 ATP11AP98196 1134 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 DNM1Q05193 864 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 ENPEPQ07075 957 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 GRAMD4Q6IC98 578 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 TCEAL6Q6IPX3 200 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 SDE2Q6IQ49 451 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 PAQR9Q6ZVX9 377 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 INTS8Q75QN2 995 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 SYT12Q8IV01 421 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 GRAMD1CQ8IYS0 662 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 FUKQ8N0W3 1084 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 TTC39CQ8N584 583 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 ZNF513Q8N8E2 541 aaPredicted RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 KIAA0895Q8NCT3 520 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 PLEKHO2Q8TD55 490 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 SLC2A14Q8TDB8 520 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 HMGB4Q8WW32 186 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 PIGKQ92643 395 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 TCEAL3Q969E4 200 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 CCDC34Q96HJ3 373 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 NT5C1AQ9BXI3 368 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 NUSAP1Q9BXS6 441 aaKnown RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 KCTD10Q9H3F6 313 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 CCSER2Q9H7U1 834 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 CYP3A43Q9HB55 503 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 PNPLA8Q9NP80 782 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 SPHK2Q9NRA0 654 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 GMIPQ9P107 970 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 EVLQ9UI08 416 aaPredicted RBP7.57□□□□□ -1.2
USP46-208ENST00000512656 PCDHA5Q9Y5H7 936 aa7.57□□□□□ -1.2
USP46-208ENST00000512656 ANKRD11Q6UB99 2663 aaPredicted RBP7.56□□□□□ -1.2
USP46-208ENST00000512656 ZFYVE26Q68DK2 2539 aa7.56□□□□□ -1.2
USP46-208ENST00000512656 PTPRDP23468 1912 aa7.56□□□□□ -1.2
USP46-208ENST00000512656 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
USP46-208ENST00000512656 A0A1B0GVL5 298 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms