RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	TULP3	O75386	442 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	KAT7	O95251	611 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	IGLV3-27	P01718	113 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	GYPC	P04921	128 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ATP5B	P06576	529 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	DCN	P07585	359 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	CHRNB2	P17787	502 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	GPD1	P21695	349 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	CD72	P21854	359 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	TARS	P26639	723 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	HNRNPH3	P31942	346 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	NNMT	P40261	264 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	PTPN9	P43378	593 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	SOX9	P48436	509 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	PGF	P49763	221 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	AIF1	P55008	147 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC12A1	Q13621	1099 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	CDH18	Q13634	790 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	BYSL	Q13895	437 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ACAP1	Q15027	740 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZC3H12A	Q5D1E8	599 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	EOGT	Q5NDL2	527 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	C10orf76	Q5T2E6	689 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	SYPL2	Q5VXT5	272 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ALKBH5	Q6P6C2	394 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	POTEH	Q6S545	545 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	STRADA	Q7RTN6	431 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF571	Q7Z3V5	609 aa	Predicted RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	TMC6	Q7Z403	805 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ANKS1B	Q7Z6G8	1248 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	C1orf210	Q8IVY1	113 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	MCOLN2	Q8IZK6	566 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ADAM32	Q8TC27	787 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF653	Q96CK0	615 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	FCRL2	Q96LA5	508 aa	Predicted RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	DNAJC7	Q99615	494 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	CNPY3	Q9BT09	278 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	METTL5	Q9NRN9	209 aa	Known RBP	7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	STIM2	Q9P246	746 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ADAMTS1	Q9UHI8	967 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	FBXO4	Q9UKT5	387 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	PLA2G4C	Q9UP65	541 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	KMT2E	Q8IZD2	1858 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	MIA3	Q5JRA6	1907 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	EIF3CL	B5ME19	914 aa	Known RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340		H0Y626	953 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	SCAMP3	O14828	347 aa	Known RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	TBL1X	O60907	577 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	MFAP3L	O75121	409 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	GABBR2	O75899	941 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	PDGFB	P01127	241 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	PENK	P01210	267 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	KLKB1	P03952	638 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	FYN	P06241	537 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	CHRNB1	P11230	501 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	SKIL	P12757	684 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	POLR2E	P19388	210 aa	Known RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	TACR2	P21452	398 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	CYLC1	P35663	651 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ETFB	P38117	255 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	CXCR3	P49682	368 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF135	P52742	658 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF143	P52747	638 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ST8SIA6	P61647	398 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZXDB	P98169	803 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	KDSR	Q06136	332 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	SULT2A1	Q06520	285 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	SFSWAP	Q12872	951 aa	Known RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF177	Q13360	481 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	CCIN	Q13939	588 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	DMC1	Q14565	340 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	STARD3	Q14849	445 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	SPA17	Q15506	151 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	TAF5	Q15542	800 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZNF528	Q3MIS6	628 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	EFHC2	Q5JST6	749 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	CCDC122	Q5T0U0	273 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	IER5L	Q5T953	404 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	PIK3R6	Q5UE93	754 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	RNF219	Q5W0B1	726 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	CWF19L1	Q69YN2	538 aa	Known RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	MON1B	Q7L1V2	547 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	MFN1	Q8IWA4	741 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	FAM217A	Q8IXS0	508 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	LGI2	Q8N0V4	545 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	AHI1	Q8N157	1196 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	NAT16	Q8N8M0	369 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	TMEM105	Q8N8V8	129 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	TERB1	Q8NA31	727 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	RXFP2	Q8WXD0	754 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	ATRIP	Q8WXE1	791 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	BHMT	Q93088	406 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC39A13	Q96H72	371 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	C1orf74	Q96LT6	269 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	RPRD1A	Q96P16	312 aa	Predicted RBP	7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	HAPLN3	Q96S86	360 aa		7.73	□□□□□ -1.17
NR1I3-231	ENST00000512340	NPY6R	Q99463	290 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms