RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 P2RY11Q96G91 374 aa9.52□□□□□ -0.89
CPNE4-210ENST00000512332 SLC2A13Q96QE2 648 aa9.52□□□□□ -0.89
CPNE4-210ENST00000512332 MAGEB5Q9BZ81 275 aa9.52□□□□□ -0.89
CPNE4-210ENST00000512332 SLC13A1Q9BZW2 595 aa9.52□□□□□ -0.89
CPNE4-210ENST00000512332 TAS2R1Q9NYW7 299 aa9.52□□□□□ -0.89
CPNE4-210ENST00000512332 NKX1-2Q9UD57 310 aaPredicted RBP9.52□□□□□ -0.89
CPNE4-210ENST00000512332 GNEQ9Y223 722 aaKnown RBP9.52□□□□□ -0.89
CPNE4-210ENST00000512332 CCL15-CCL14A0A0B4J2E2 113 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 HAS3O00219 553 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 GABRDO14764 452 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ADCY6O43306 1168 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 GSRP00390 522 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 RPSAP08865 295 aaKnown RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ESRRAP11474 423 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 NPR3P17342 541 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 HCAR3P49019 387 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 SULT1E1P49888 294 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 BMPR2Q13873 1038 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 CHI3L2Q15782 390 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 CCL15Q16663 113 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 FAM110CQ1W6H9 321 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 HSF5Q4G112 596 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ZNF618Q5T7W0 954 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 OTUD1Q5VV17 481 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 DENND5BQ6ZUT9 1274 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 FAM131BQ86XD5 332 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 CRLF3Q8IUI8 442 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 PYROXD2Q8N2H3 581 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 NME8Q8N427 588 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 RNF139Q8WU17 664 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 BRI3BPQ8WY22 251 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 NTAN1Q96AB6 310 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ZNF570Q96NI8 536 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 LGMNQ99538 433 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 STN1Q9H668 368 aaKnown RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 FBXO6Q9NRD1 293 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 DCDC2Q9UHG0 476 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 WDR27A2RRH5 827 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 C9IYK1 514 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 RNF103O00237 685 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 NCAM2O15394 837 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 DYNC1LI2O43237 492 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 MFSD11O43934 449 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 MAGEC1O60732 1142 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 GLRA3O75311 464 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 FBXO21O94952 628 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 TKTP29401 623 aaKnown RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 CRYBB1P53674 252 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 GJA9P57773 515 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 SOX4Q06945 474 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 SCAPQ12770 1279 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 STX3Q13277 289 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 DPYSQ14117 519 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 DCAF6Q58WW2 860 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 PACS1Q6VY07 963 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 PDZD4Q76G19 769 aaPredicted RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 TMPRSS6Q8IU80 811 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ARHGAP24Q8N264 748 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 PDCD7Q8N8D1 485 aaKnown RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 TMEM40Q8WWA1 233 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 ATP2A3Q93084 1043 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 WNT8BQ93098 351 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 MECRQ9BV79 373 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 NMUR2Q9GZQ4 415 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 BRD8Q9H0E9 1235 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 PCMTD2Q9NV79 361 aa9.51□□□□□ -0.89
CPNE4-210ENST00000512332 PIN4Q9Y237 131 aaKnown RBP9.51□□□□□ -0.89
CPNE4-210ENST00000512332 CYB561D2O14569 222 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 LIN7AO14910 233 aaPredicted RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 LUC7L3O95232 432 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ALDOAP04075 364 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 PTPN1P18031 435 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 RAP1GDS1P52306 607 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ZNF135P52742 658 aaPredicted RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 CLNS1AP54105 237 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 MFSD10Q14728 455 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 CES4AQ5XG92 561 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 RFX8Q6ZV50 586 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 PAQR9Q6ZVX9 377 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ARID3BQ8IVW6 561 aaPredicted RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 NPLOC4Q8TAT6 608 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 DNAJB3Q8WWF6 145 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 FAM149B1Q96BN6 582 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 PGAP3Q96FM1 320 aaPredicted RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 PARK7Q99497 189 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 TRIM56Q9BRZ2 755 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 FAM96AQ9H5X1 160 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 HBS1LQ9Y450 684 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 IPPQ9Y573 584 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ZNF236Q9UL36 1845 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 ERI2A8K979 691 aaKnown RBP9.5□□□□□ -0.89
CPNE4-210ENST00000512332 M0QYT0 321 aa9.5□□□□□ -0.89
CPNE4-210ENST00000512332 DCLK1O15075 740 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms