RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 AP3S1Q92572 193 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 EMID1Q96A84 441 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SHDQ96IW2 340 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 NXF1Q9UBU9 619 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 RSL24D1Q9UHA3 163 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 GNPTGQ9UJJ9 305 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ZNF232Q9UNY5 417 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PIN4Q9Y237 131 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PTPRDP23468 1912 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 HELZP42694 1942 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 APOC4-APOC2K7ER74 178 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 TXNDC9O14530 226 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SYNCRIPO60506 623 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 APOC2P02655 101 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CRYBB1P53674 252 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SP4Q02446 784 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ELP6Q0PNE2 266 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 GRAMD4Q6IC98 578 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SWSAP1Q6NVH7 229 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 INTS5Q6P9B9 1019 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ADGRG6Q86SQ4 1221 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 LRRC43Q8N309 656 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ZNF333Q96JL9 665 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 POP1Q99575 1024 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 C19orf43Q9BQ61 176 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 L2HGDHQ9H9P8 463 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SIGLEC16A6NMB1 481 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 C1QTNF3-AMACRE9PGA6 284 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 EIF3FO00303 357 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ALBP02768 609 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ATP1A1P05023 1023 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CHRNA5P30532 468 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 MAGEA8P43361 318 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 IKBKEQ14164 716 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SPPL2BQ8TCT7 592 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SLC26A7Q8TE54 656 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 OTUB2Q96DC9 234 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 LRIG1Q96JA1 1093 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PIH1D3Q9NQM4 214 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 DZANK1Q9NVP4 752 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 THAP1Q9NVV9 213 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CPNE7Q9UBL6 633 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SNX7Q9UNH6 387 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PCDHB5Q9Y5E4 795 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 TRAV19A0A0A6YYK7 116 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 DYNC1LI2O43237 492 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CPB1P15086 417 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PTGER2P43116 358 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 RAP1GAPP47736 663 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ST13P50502 369 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 BLKP51451 505 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PLTPP55058 493 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 BNC1Q01954 994 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 YWHAHQ04917 246 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CDH18Q13634 790 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 BOP1Q14137 746 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CNGA2Q16280 664 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 FAM187BQ17R55 369 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 LRRC8DQ7L1W4 858 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 TPCN2Q8NHX9 752 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CSGALNACT1Q8TDX6 532 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PLD4Q96BZ4 506 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 VPS11Q9H270 941 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 UNC45AQ9H3U1 944 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 DBNDD1Q9H9R9 158 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ADAMTS1Q9UHI8 967 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SATB2Q9UPW6 733 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SNRNP200O75643 2136 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SENP3-EIF4A1A0A087X0R7 540 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 RGSL1A5PLK6 1076 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 H3BNH8 94 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PER2O15055 1255 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 C1RP00736 705 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 HRH2P25021 359 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 SERPINA4P29622 427 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ARSEP51690 589 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 COPAP53621 1224 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 RPL19P84098 196 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CYP24A1Q07973 514 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ACOX1Q15067 660 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 AAK1Q2M2I8 961 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 GNASQ5JWF2 1037 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 TPGS2Q68CL5 300 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 EFCAB12Q6NXP0 572 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 CDC42EP5Q6NZY7 148 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PIWIL4Q7Z3Z4 852 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 RASSF3Q86WH2 238 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 PNPT1Q8TCS8 783 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 GPR101Q96P66 508 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 TLR7Q9NYK1 1049 aaKnown RBP5.06□□□□□ -1.6
PTPN13-209ENST00000511467 TRPS1Q9UHF7 1281 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 NAGPAQ9UK23 515 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 USP18Q9UMW8 372 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 ZNF451Q9Y4E5 1061 aa5.06□□□□□ -1.6
PTPN13-209ENST00000511467 GREB1Q4ZG55 1949 aa5.05□□□□□ -1.6
PTPN13-209ENST00000511467 CCDC154A6NI56 674 aa5.05□□□□□ -1.6
PTPN13-209ENST00000511467 PSMD12O00232 456 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-209ENST00000511467 CLGNO14967 610 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms