RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CLEC4CQ8WTT0 213 aa16.62■□□□□ 0.25
RAB40C-202ENST00000509637 ERCC4Q92889 916 aaPredicted RBP16.62■□□□□ 0.25
RAB40C-202ENST00000509637 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
RAB40C-202ENST00000509637 SLC2A11Q9BYW1 496 aa16.62■□□□□ 0.25
RAB40C-202ENST00000509637 EBF2Q9HAK2 575 aa16.62■□□□□ 0.25
RAB40C-202ENST00000509637 ABCB8Q9NUT2 735 aa16.62■□□□□ 0.25
RAB40C-202ENST00000509637 INTS6Q9UL03 887 aaKnown RBP16.62■□□□□ 0.25
RAB40C-202ENST00000509637 C10orf142B7Z368 130 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 O00370 1275 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 PIK3R2O00459 728 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 NPC1O15118 1278 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 SYNCRIPO60506 623 aaKnown RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 ZNF132P52740 706 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 EDRF1Q3B7T1 1238 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 MPPE1Q53F39 396 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 FAM133BQ5BKY9 247 aaKnown RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 NADSYN1Q6IA69 706 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 SERPINA13PQ6UXR4 307 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.61■□□□□ 0.251e-6■■■□□ 14.6
RAB40C-202ENST00000509637 UCMAQ8WVF2 138 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 KAT5Q92993 513 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 PLD4Q96BZ4 506 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 FAXDC2Q96IV6 333 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 CDK5RAP1Q96SZ6 601 aaKnown RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 ZDHHC5Q9C0B5 715 aa16.61■□□□□ 0.25
RAB40C-202ENST00000509637 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.61■□□□□ 0.25
RAB40C-202ENST00000509637 IGLV3-27P01718 113 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 FYNP06241 537 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 ZNF883P0CG24 379 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
RAB40C-202ENST00000509637 OXTRP30559 389 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 MATKP42679 507 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 RGS7P49802 495 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 DAOAP59103 153 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 LRMPQ12912 555 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 PNOCQ13519 176 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 CUL2Q13617 745 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 EIF4HQ15056 248 aaKnown RBP16.6■□□□□ 0.25
RAB40C-202ENST00000509637 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 PMF1Q6P1K2 205 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 ARHGAP18Q8N392 663 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 SETD7Q8WTS6 366 aaKnown RBP16.6■□□□□ 0.25
RAB40C-202ENST00000509637 SLC35F5Q8WV83 523 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 BIRC7Q96CA5 298 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 TMA16Q96EY4 203 aaKnown RBP16.6■□□□□ 0.25
RAB40C-202ENST00000509637 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 TM9SF3Q9HD45 589 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 SERGEFQ9UGK8 458 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 PCDHB9Q9Y5E1 797 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 CELSR3Q9NYQ7 3312 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 ASXL3Q9C0F0 2248 aa16.6■□□□□ 0.25
RAB40C-202ENST00000509637 URB1O60287 2271 aaKnown RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 ACACAQ13085 2346 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 PLXNA2O75051 1894 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 TRIM49BA6NDI0 452 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 WNT9AO14904 365 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 TIMM44O43615 452 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 CYBBP04839 570 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 PABPC1P11940 636 aaKnown RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 CAMK2BQ13554 666 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 COL28A1Q2UY09 1125 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 SOWAHCQ53LP3 525 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 PRAMEF14Q5SWL7 426 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 ADGRF1Q5T601 910 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 PIK3R6Q5UE93 754 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 MBLAC2Q68D91 279 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 TMPRSS7Q7RTY8 843 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 KCTD13Q8WZ19 329 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 MRGPRX3Q96LB0 322 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 PRICKLE1Q96MT3 831 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 BBC3Q96PG8 261 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 KIAA1522Q9P206 1035 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
RAB40C-202ENST00000509637 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 HBS1LQ9Y450 684 aaKnown RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 ANKRD11Q6UB99 2663 aaPredicted RBP16.59■□□□□ 0.25
RAB40C-202ENST00000509637 A0A1W2PQ27 194 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 A0A1W2PQ64 194 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 FAM149AA5PLN7 773 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 H0Y8X5 98 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 WNT1P04628 370 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 IGHV4-34P06331 123 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 LCP1P13796 627 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 BCAT1P54687 386 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 CLDN6P56747 220 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 BST2Q10589 180 aaKnown RBP16.58■□□□□ 0.24
RAB40C-202ENST00000509637 FNDC3BQ53EP0 1204 aaKnown RBP16.58■□□□□ 0.24
RAB40C-202ENST00000509637 SGO2Q562F6 1265 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 FSCBQ5H9T9 825 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 MSANTD2Q6P1R3 559 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 MMS22LQ6ZRQ5 1243 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 LMO3Q8TAP4 145 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms