RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, human

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-223	ENST00000508608	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.44	□□□□□ -0.26
CAST-223	ENST00000508608	DTL	Q9NZJ0	730 aa		13.44	□□□□□ -0.26
CAST-223	ENST00000508608	TXNDC16	Q9P2K2	825 aa		13.44	□□□□□ -0.26
CAST-223	ENST00000508608	EMCN	Q9ULC0	261 aa		13.44	□□□□□ -0.26
CAST-223	ENST00000508608	DERA	Q9Y315	318 aa		13.44	□□□□□ -0.26
CAST-223	ENST00000508608	OPHN1	O60890	802 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	USP2	O75604	605 aa	Predicted RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	UPP2	O95045	317 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	ALDOA	P04075	364 aa	Known RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	INSRR	P14616	1297 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	PAPOLA	P51003	745 aa	Known RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	PDE1C	Q14123	709 aa	Predicted RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	PCLAF	Q15004	111 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	ARHGAP17	Q68EM7	881 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	NCBP2-AS2	Q69YL0	99 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	UNC93A	Q86WB7	457 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	TRPM4	Q8TD43	1214 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	LRRN4	Q8WUT4	740 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	CLMN	Q96JQ2	1002 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	OLFM3	Q96PB7	478 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	KCTD15	Q96SI1	283 aa	Predicted RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	TTC1	Q99614	292 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	RNPEP	Q9H4A4	650 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	CSAD	Q9Y600	493 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	COL1A2	P08123	1366 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	POLR2A	P24928	1970 aa	Known RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608		A0A088AWK7	358 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	ARHGAP42	A6NI28	874 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	CCNT2	O60583	730 aa	Known RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	ZNF189	O75820	626 aa	Predicted RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	DGKI	O75912	1065 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	BAG2	O95816	211 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	GSR	P00390	522 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	C6orf222	P0C671	652 aa	Predicted RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	MX2	P20592	715 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	GRM5	P41594	1212 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	GRIA1	P42261	906 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	PDE1B	Q01064	536 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	LINC01465	Q8N7H1	131 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	PPP2R3C	Q969Q6	453 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	CMTM5	Q96DZ9	223 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	ZNF778	Q96MU6	729 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	MRPL45	Q9BRJ2	306 aa	Known RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	DNAI2	Q9GZS0	605 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	MTMR10	Q9NXD2	777 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	SNX9	Q9Y5X1	595 aa		13.43	□□□□□ -0.26
CAST-223	ENST00000508608	MYO18A	Q92614	2054 aa	Known RBP	13.43	□□□□□ -0.26
CAST-223	ENST00000508608	MEI4	A8MW99	385 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	TSPAN1	O60635	241 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	SIN3B	O75182	1162 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	LYPLA1	O75608	230 aa	Predicted RBP	13.42	□□□□□ -0.26
CAST-223	ENST00000508608	TOP3B	O95985	862 aa	Known RBP	13.42	□□□□□ -0.26
CAST-223	ENST00000508608	ITGA2B	P08514	1039 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	GNAT1	P11488	350 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	ALOX15	P16050	662 aa	Predicted RBP	13.42	□□□□□ -0.26
CAST-223	ENST00000508608	BCAT1	P54687	386 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	BST2	Q10589	180 aa	Known RBP	13.42	□□□□□ -0.26
CAST-223	ENST00000508608	DCAF4L1	Q3SXM0	396 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	RNF220	Q5VTB9	566 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	C16orf46	Q6P387	395 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	STRADA	Q7RTN6	431 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	MFN1	Q8IWA4	741 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	COLGALT1	Q8NBJ5	622 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	NLRP7	Q8WX94	980 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	COPS5	Q92905	334 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	GBP5	Q96PP8	586 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	PPP1R16B	Q96T49	567 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	MMP19	Q99542	508 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	B3GNT5	Q9BYG0	378 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	DNAJC25-GNG10	A0A024R161	153 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	ITM2A	O43736	263 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	CNMD	O75829	334 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	PROC	P04070	461 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	VAV1	P15498	845 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	KCNA4	P22459	653 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	ACADSB	P45954	432 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	ROR2	Q01974	943 aa	Known RBP	13.42	□□□□□ -0.26
CAST-223	ENST00000508608	DEUP1	Q05D60	604 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	CCDC153	Q494R4	210 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	DHDDS	Q86SQ9	333 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	RASSF3	Q86WH2	238 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	PSTK	Q8IV42	348 aa	Known RBP	13.42	□□□□□ -0.26
CAST-223	ENST00000508608	CCDC33	Q8N5R6	958 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	ZFAND2B	Q8WV99	257 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	PLEKHA5	Q9HAU0	1116 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	S100A14	Q9HCY8	104 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	IL1RAPL1	Q9NZN1	696 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	PPM1H	Q9ULR3	514 aa		13.42	□□□□□ -0.26
CAST-223	ENST00000508608	IRF6	O14896	467 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	POLB	P06746	335 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	LYN	P07948	512 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	TFE3	P19532	575 aa	Predicted RBP	13.41	□□□□□ -0.26
CAST-223	ENST00000508608	MGAT1	P26572	445 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	ADORA2A	P29274	412 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	CDK7	P50613	346 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	XIAP	P98170	497 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	CDC16	Q13042	620 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	ARHGAP18	Q8N392	663 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	GALNT15	Q8N3T1	639 aa		13.41	□□□□□ -0.26
CAST-223	ENST00000508608	LRRC52	Q8N7C0	313 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms