RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ANKRD49Q8WVL7 239 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 ITFG2Q969R8 447 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 VPS33AQ96AX1 596 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 SDCCAG3Q96C92 435 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 NMD3Q96D46 503 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 LRRC46Q96FV0 321 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 TUBGCP5Q96RT8 1024 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PRPF18Q99633 342 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PAIP2Q9BPZ3 127 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CRACR2AQ9BSW2 395 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 EIF2AQ9BY44 585 aaKnown RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 FUT8Q9BYC5 575 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 SUDS3Q9H7L9 328 aaPredicted RBP4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PRDM8Q9NQV8 689 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 SNX15Q9NRS6 342 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 RGL1Q9NZL6 768 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 PI4KBQ9UBF8 816 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CAMK2AQ9UQM7 478 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 CCL27Q9Y4X3 112 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 HS3ST4Q9Y661 456 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 AP1M2Q9Y6Q5 423 aa4.59□□□□□ -1.67
SMARCA5-202ENST00000508573 LINC00854A0A1B0GVQ3 168 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CACNB4O00305 520 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 PALMO75781 387 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 OLFM2O95897 454 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 F9P00740 461 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 PRLP01236 227 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ANXA1P04083 346 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ITGB1P05556 798 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 PDHA1P08559 390 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 TYRP14679 529 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 STIP1P31948 543 aaKnown RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 GP5P40197 560 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 FLT3LGP49771 235 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 RPS3AP61247 264 aaKnown RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 HTD2P86397 168 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 GBE1Q04446 702 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ZBTB16Q05516 673 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 MPP3Q13368 585 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 EPHA7Q15375 998 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CSRP2Q16527 193 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ALG11Q2TAA5 492 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 RABL6Q3YEC7 729 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 TIGD2Q4W5G0 525 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ZNF805Q5CZA5 627 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CCDC183Q5T5S1 534 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 C1QL3Q5VWW1 255 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 TRAT1Q6PIZ9 186 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ATF7IPQ6VMQ6 1270 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 IKBIPQ70UQ0 350 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 RHOUQ7L0Q8 258 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 RRAGAQ7L523 313 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 TDRD5Q8NAT2 981 aaKnown RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 OR52K2Q8NGK3 314 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 OR6Y1Q8NGX8 325 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CTCFLQ8NI51 663 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CEP76Q8TAP6 659 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 SMCR8Q8TEV9 937 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ST8SIA2Q92186 375 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 SHC3Q92529 594 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 NCSTNQ92542 709 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 MTFMTQ96DP5 389 aaKnown RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 KTI12Q96EK9 354 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 PGAP3Q96FM1 320 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 SUCLG2Q96I99 432 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CITED2Q99967 270 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 FTOQ9C0B1 505 aaKnown RBP eCLIP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 C1orf21Q9H246 121 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 WDR26Q9H7D7 661 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 VPS37BQ9H9H4 285 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 MID1IP1Q9NPA3 183 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 NRIP3Q9NQ35 241 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 SNTG1Q9NSN8 517 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 PNPOQ9NVS9 261 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 AIPL1Q9NZN9 384 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 KCMF1Q9P0J7 381 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 C6orf203Q9P0P8 240 aaPredicted RBP4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 ACTR3BQ9P1U1 418 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 CFAP45Q9UL16 551 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 HSF4Q9ULV5 492 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 PCDHA6Q9UN73 950 aa4.58□□□□□ -1.68
SMARCA5-202ENST00000508573 RAD54L2Q9Y4B4 1467 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 A0A087WZ62 844 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 A0A1W2PQ09 198 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 UBA6A0AVT1 1052 aaPredicted RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ZAR1LA6NP61 321 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 UBXN8O00124 270 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 TBC1D4O60343 1298 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 RTN2O75298 545 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ENTPD3O75355 529 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 STC2O76061 302 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 SCAF4O95104 1147 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 ALADP13716 330 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 GSPT1P15170 499 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 GNAT2P19087 354 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 PAX7P23759 505 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 EEF1DP29692 281 aaKnown RBP4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 GCH1P30793 250 aa4.57□□□□□ -1.68
SMARCA5-202ENST00000508573 AKT1P31749 480 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms