RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 USP3Q9Y6I4 520 aa9.84□□□□□ -0.83
NEDD9-211ENST00000508546 TDRD6O60522 2096 aaKnown RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 VPS37CA5D8V6 355 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 EXOC3O60645 756 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 RFPL3O75679 317 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 CLSTN1O94985 981 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 LDOC1O95751 146 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 RPN1P04843 607 aaKnown RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ADORA2BP29275 332 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ACADVLP49748 655 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 RPS14P62263 151 aaKnown RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 RACK1P63244 317 aaKnown RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ASIC1P78348 528 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 INCA1Q0VD86 236 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 SLC39A14Q15043 492 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 E2F4Q16254 413 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ZACNQ401N2 412 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 TTC31Q49AM3 519 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 SPACA3Q8IXA5 215 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 NELFCDQ8IXH7 590 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 CACTIN-AS1Q8N1I8 211 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 PDILTQ8N807 584 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 WFIKKN2Q8TEU8 576 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 DDI1Q8WTU0 396 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 TSC1Q92574 1164 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 JAKMIP2Q96AA8 810 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ELMO3Q96BJ8 720 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 CYFIP2Q96F07 1278 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 WBP1Q96G27 269 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ELF4Q99607 663 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ACE2Q9BYF1 805 aaPredicted RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 ANKMY1Q9P2S6 941 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 TFIP11Q9UBB9 837 aaKnown RBP9.83□□□□□ -0.84
NEDD9-211ENST00000508546 RASAL2Q9UJF2 1139 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 PLA2G4CQ9UP65 541 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 AK5Q9Y6K8 562 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 CREBBPQ92793 2442 aa9.83□□□□□ -0.84
NEDD9-211ENST00000508546 C2CD3Q4AC94 2353 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 A0A1W2PPC4 97 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 YKT6O15498 198 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 FSBPO95073 299 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 ASS1P00966 412 aaKnown RBP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 DNTTP04053 509 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 IGHV4-34P06331 123 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 PDCP20941 246 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 HOXD9P28356 352 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 HLA-FP30511 346 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 ASPAP45381 313 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 C21orf59P57076 290 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 ZNF445P59923 1031 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 IL9RQ01113 521 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 RHDQ02161 417 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 EFEMP1Q12805 493 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 TARDBPQ13148 414 aaKnown RBP eCLIP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 ILKQ13418 452 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 FNDC3BQ53EP0 1204 aaKnown RBP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 MPPE1Q53F39 396 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 HES3Q5TGS1 186 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 KIAA0895LQ68EN5 471 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 FBXL19Q6PCT2 694 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 USP30Q70CQ3 517 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 UNC13DQ70J99 1090 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 KIAA0907Q7Z7F0 614 aaPredicted RBP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 GATAD2AQ86YP4 633 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 DENND1CQ8IV53 801 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 GOLGA5Q8TBA6 731 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 SAP25Q8TEE9 199 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 TMEM174Q8WUU8 243 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 GOLGA1Q92805 767 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 FGF11Q92914 225 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 SKA1Q96BD8 255 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 CNDP2Q96KP4 475 aaKnown RBP9.82□□□□□ -0.84
NEDD9-211ENST00000508546 TWNKQ96RR1 684 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 C7orf25Q9BPX7 421 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 NT5C1AQ9BXI3 368 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 DUSP16Q9BY84 665 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 PRSS16Q9NQE7 514 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 MARCH2Q9P0N8 246 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 IL17BQ9UHF5 180 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 STRIP2Q9ULQ0 834 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 SCML1Q9UN30 329 aa9.82□□□□□ -0.84
NEDD9-211ENST00000508546 BOD1L1Q8NFC6 3051 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 C10orf142B7Z368 130 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 CBX4O00257 560 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 ITGAVP06756 1048 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 HMBSP08397 361 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 ABCB4P21439 1286 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 CEBPZQ03701 1054 aaKnown RBP9.81□□□□□ -0.84
NEDD9-211ENST00000508546 CCDC173Q0VFZ6 552 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 DNAJC3Q13217 504 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 SHBQ15464 509 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 TRIP4Q15650 581 aaPredicted RBP9.81□□□□□ -0.84
NEDD9-211ENST00000508546 ZNF776Q68DI1 518 aaPredicted RBP9.81□□□□□ -0.84
NEDD9-211ENST00000508546 FAM173BQ6P4H8 233 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 CHST9Q7L1S5 443 aa9.81□□□□□ -0.84
NEDD9-211ENST00000508546 ADIPOR2Q86V24 386 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms