RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LMX1AQ8TE12 382 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 EXT2Q93063 718 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 STAMBPL1Q96FJ0 436 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 HES6Q96HZ4 224 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC1Q96KC8 554 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 LRGUKQ96M69 825 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CITED4Q96RK1 184 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 WNT8AQ9H1J5 351 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 OSGEPL1Q9H4B0 414 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 EBF3Q9H4W6 596 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM134Q9H6X4 195 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ELOVL2Q9NXB9 296 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CXXC1Q9P0U4 656 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 COL20A1Q9P218 1284 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DEC1Q9P2X7 70 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 NDOR1Q9UHB4 597 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ZMYM5Q9UJ78 669 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MCM8Q9UJA3 840 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 NUMBLQ9Y6R0 609 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PIAS3Q9Y6X2 628 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 GBF1Q92538 1859 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PARP14Q460N5 1801 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 A0A1W2PRQ8 180 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DYTNA2CJ06 578 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC14BA6NHZ5 514 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 H3BRJ5 948 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 RHOBTB3O94955 611 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 OR4Q2P0C623 313 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TROVE2P10155 538 aaKnown RBP eCLIP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 HOXB2P14652 356 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CEBPBP17676 345 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DUSP3P51452 185 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ATP2C1P98194 919 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DMTNQ08495 405 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 OXLD1Q5BKU9 147 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MZT2BQ6NZ67 158 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 C16orf46Q6P387 395 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 MOXD1Q6UVY6 613 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC14Q6Y2X3 702 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CAPN12Q6ZSI9 719 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC80Q76M96 950 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 KRT74Q7RTS7 529 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PRICKLE2Q7Z3G6 844 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ANKS1BQ7Z6G8 1248 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 VSIG1Q86XK7 387 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SRRM1Q8IYB3 904 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 ATPAF2Q8N5M1 289 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PDCD7Q8N8D1 485 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 PRR7Q8TB68 274 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 NLNQ9BYT8 704 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 NCOR1P1Q9H4R4 102 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 BCAS3Q9H6U6 928 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 GRPEL1Q9HAV7 217 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 TUBGCP4Q9UGJ1 667 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 APPL1Q9UKG1 709 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.05□□□□□ -1.92
NEDD4-208ENST00000508342 R4GN57 208 aa3.05□□□□□ -1.92
NEDD4-208ENST00000508342 SALL3Q9BXA9 1300 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 E2F8A0AVK6 867 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PP2D1A8MPX8 630 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 EFCAB8A8MWE9 144 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KRIT1O00522 736 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MED24O75448 989 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CYP3A4P08684 503 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 SKILP12757 684 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FXR2P51116 673 aaKnown RBP eCLIP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PDCLQ13371 301 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ANGPT1Q15389 498 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 STILQ15468 1287 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 LEXMQ3ZCV2 418 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 DGKKQ5KSL6 1271 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FAM102AQ5T9C2 384 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KIAA0319Q5VV43 1072 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 C1orf210Q8IVY1 113 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 CACNA2D3Q8IZS8 1091 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 C1orf216Q8TAB5 229 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 PRR11Q96HE9 360 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 IGSF21Q96ID5 467 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GSDMAQ96QA5 445 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ALG2Q9H553 416 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 LATS2Q9NRM7 1088 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 IL36AQ9UHA7 158 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MID2Q9UJV3 735 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TNFSF13BQ9Y275 285 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 FIS1Q9Y3D6 152 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ZMYM2Q9UBW7 1377 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 MYO16Q9Y6X6 1858 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 TRIP12Q14669 1992 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 COL4A4P53420 1690 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 KCNJ18B7U540 433 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 F5H423 210 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 EEF2KO00418 725 aaKnown RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 ZSCAN9O15535 394 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-208ENST00000508342 H2AFZP0C0S5 128 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HLA-EP13747 358 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GJA1P17302 382 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 HTR1BP28222 390 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GRK3P35626 688 aa3.04□□□□□ -1.92
NEDD4-208ENST00000508342 GEMIN4P57678 1058 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms