RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 DOCK1Q14185 1865 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 GCATO75600 419 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 SMIM18P0DKX4 95 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 VDRP11473 427 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 FOLH1Q04609 750 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 USP4Q13107 963 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 ITGA9Q13797 1035 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 ANKRD20A4Q4UJ75 823 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 BOLA3Q53S33 107 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 KCNT2Q6UVM3 1135 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 EEPD1Q7L9B9 569 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 SPATA24Q86W54 205 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 FBXW8Q8N3Y1 598 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 DRAXINQ8NBI3 349 aaPredicted RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 PPP4R1Q8TF05 950 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 JADE3Q92613 823 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 STN1Q9H668 368 aaKnown RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 IFT122Q9HBG6 1241 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 DNAJC28Q9NX36 388 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 INPP5FQ9Y2H2 1132 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 UTRNP46939 3433 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 C15orf38-AP3S2A0A0A6YYH1 394 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 ZBTB42B2RXF5 422 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 GPR25O00155 361 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 HDAC4P56524 1084 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 SESN2P58004 480 aaPredicted RBP13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 STXBP5Q5T5C0 1151 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 ZNF280CQ8ND82 737 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 KHSRPQ92945 711 aaKnown RBP eCLIP13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 EVPLQ92817 2033 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 E9PBE3 544 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 KLHL41O60662 606 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 COX4I1P13073 169 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 VAV1P15498 845 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 CNTFP26441 200 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 MGAT1P26572 445 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 CHN2P52757 468 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 ABCE1P61221 599 aaKnown RBP13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 TLR1Q15399 786 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 STILQ15468 1287 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 DBN1Q16643 649 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 GOLGA7BQ2TAP0 167 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 BSPRYQ5W0U4 402 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 STEAP4Q687X5 459 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 CES3Q6UWW8 571 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 OLFML1Q6UWY5 402 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 KBTBD6Q86V97 674 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 SCUBE3Q8IX30 993 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 NME8Q8N427 588 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 OPTNQ96CV9 577 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 CMTM5Q96DZ9 223 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 B3GNT5Q9BYG0 378 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 COPG2Q9UBF2 871 aa13.81□□□□□ -0.2
SNCAIP-209ENST00000508017 ACKR2O00590 384 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 CASQ2O14958 399 aaPredicted RBP13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ALDH1A2O94788 518 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 PYGLP06737 847 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ITGA2BP08514 1039 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 RALBP11234 206 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ALOX15P16050 662 aaPredicted RBP13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 SDC4P31431 198 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 SEMA5AQ13591 1074 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 SLC9B1Q4ZJI4 515 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 PRAMEF18Q5VWM3 479 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 FAM160B1Q5W0V3 765 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 TMC7Q7Z402 723 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 CMC1Q7Z7K0 106 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 AGR3Q8TD06 166 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 MAPK15Q8TD08 544 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ACMSDQ8TDX5 336 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ZNF670Q9BS34 389 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 CEP41Q9BYV8 373 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 MTMR10Q9NXD2 777 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 DTNAQ9Y4J8 743 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ZNF638Q14966 1978 aaKnown RBP13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 PTPRAP18433 802 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ALDH1A3P47895 512 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 MTTPP55157 894 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 XIAPP98170 497 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 SNAPC2Q13487 334 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 LY6KQ17RY6 165 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 NIM1KQ8IY84 436 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 ZNF781Q8N8C0 355 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 HPDLQ96IR7 371 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 MIS12Q9H081 205 aa13.8□□□□□ -0.2
SNCAIP-209ENST00000508017 FZD8Q9H461 694 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms