RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 HSPA12BQ96MM6 686 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 CNTNAP3BQ96NU0 1288 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 NUP58Q9BVL2 599 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 CNTNAP3Q9BZ76 1288 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 CAPN10Q9HC96 672 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 UBE2TQ9NPD8 197 aaPredicted RBP15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 TMEM74BQ9NUR3 256 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 TMEM51Q9NW97 253 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 WSB2Q9NYS7 404 aaPredicted RBP15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 SUN2Q9UH99 717 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 TLR6Q9Y2C9 796 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 CAPN9O14815 690 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 OPHN1O60890 802 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 GADD45BO75293 160 aaPredicted RBP15□□□□□ -0.01
HMGCS1-203ENST00000507004 APOEP02649 317 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 ASLP04424 464 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 EPHX1P07099 455 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 DLDP09622 509 aaKnown RBP15□□□□□ -0.01
HMGCS1-203ENST00000507004 PABPC1P11940 636 aaKnown RBP15□□□□□ -0.01
HMGCS1-203ENST00000507004 HLA-FP30511 346 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC14A1Q13336 389 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 SH3PXD2AQ5TCZ1 1133 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 PIK3R6Q5UE93 754 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 CHST9Q7L1S5 443 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 KIAA0907Q7Z7F0 614 aaPredicted RBP15□□□□□ -0.01
HMGCS1-203ENST00000507004 ARHGEF19Q8IW93 802 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 FAM114A1Q8IWE2 563 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 KDM1BQ8NB78 822 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 DNASE2BQ8WZ79 361 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 KAT5Q92993 513 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 FAM149B1Q96BN6 582 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 KREMEN1Q96MU8 473 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 NOX5Q96PH1 765 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC4A5Q9BY07 1137 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 ST7Q9NRC1 585 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 CHMP5Q9NZZ3 219 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC12A6Q9UHW9 1150 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 DACH1Q9UI36 760 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 GGA2Q9UJY4 613 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 TNRC6BQ9UPQ9 1833 aaKnown RBP15□□□□□ -0.01
HMGCS1-203ENST00000507004 ACACBO00763 2458 aa15□□□□□ -0.01
HMGCS1-203ENST00000507004 MEI4A8MW99 385 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 WASH3PC4AMC7 463 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 ARHGAP33O14559 1287 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 MSI1O43347 362 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 TSPAN3O60637 253 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 GLI1P08151 1106 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC2A3P11169 496 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 POLR2EP19388 210 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 GNA15P30679 374 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 ST8SIA6P61647 398 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 CAMK2GQ13555 558 aaPredicted RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 TPD52L1Q16890 204 aaPredicted RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 UAP1L1Q3KQV9 507 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 FNDC3BQ53EP0 1204 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 TMEM110Q86TL2 294 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 FIBINQ8TAL6 211 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 DQX1Q8TE96 717 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 ZNF606Q8WXB4 792 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 TOE1Q96GM8 510 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 PPP1R9BQ96SB3 815 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 ZSWIM1Q9BR11 485 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 MKRN2Q9H000 416 aaKnown RBP14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 MIS12Q9H081 205 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 TMEM245Q9H330 911 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 THAP9Q9H5L6 903 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 POPDC2Q9HBU9 364 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 APEX2Q9UBZ4 518 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 SCML1Q9UN30 329 aa14.99□□□□□ -0.01
HMGCS1-203ENST00000507004 A0A1B0GTW7 788 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 THAP12O43422 761 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 LETM1O95202 739 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 MOCS3O95396 460 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 MAPK8P45983 427 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 TPMTP51580 245 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 OXCT1P55809 520 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 ZNF252P-AS1Q0IIN9 211 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 SEMA3BQ13214 749 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 EXOC3L4Q17RC7 722 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 TTC31Q49AM3 519 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 CT47A1Q5JQC4 288 aaPredicted RBP14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 MBLAC2Q68D91 279 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 IL27RAQ6UWB1 636 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC41A1Q8IVJ1 513 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 MFN1Q8IWA4 741 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 P2RY11Q96G91 374 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 SLC39A13Q96H72 371 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 LHX5Q9H2C1 402 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 ABCB8Q9NUT2 735 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 DNAAF2Q9NVR5 837 aaKnown RBP14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 TJP2Q9UDY2 1190 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 CLEC4EQ9ULY5 219 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 CEP83Q9Y592 693 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 CKAP5Q14008 2032 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 CEP192Q8TEP8 1941 aa14.98□□□□□ -0.01
HMGCS1-203ENST00000507004 ATXN2Q99700 1313 aaKnown RBP14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 METTL12A8MUP2 240 aa14.97□□□□□ -0.01
HMGCS1-203ENST00000507004 H0Y626 953 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms