RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 VPS4AQ9UN37 437 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 C19orf53Q9UNZ5 99 aaPredicted RBP3.31□□□□□ -1.88
GYPB-207ENST00000506679 LZTS1Q9Y250 596 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 CYP3A7-CYP3A51PA0A087WV96 503 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 SMIM35A0A1B0GVV1 85 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 MBD3L5A6NJ08 208 aaPredicted RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 TTC34A8MYJ7 566 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 IPO5O00410 1097 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 PPP6R2O75170 966 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 FAM155BO75949 473 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 KAT7O95251 611 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 CYP3A7P24462 503 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 CST5P28325 142 aaPredicted RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 TACR3P29371 465 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 MPGP29372 298 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 SLC8A1P32418 973 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 SOX2P48431 317 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 TAS2R50P59544 299 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 KPNB1Q14974 876 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 CC2D1BQ5T0F9 858 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 PAPD7Q5XG87 772 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 JMJD6Q6NYC1 403 aaPredicted RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 WDR93Q6P2C0 686 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 ZNF474Q6S9Z5 364 aaPredicted RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 KLHL17Q6TDP4 642 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 RAB11FIP2Q7L804 512 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 UBE2Q1Q7Z7E8 422 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 OSR1Q8TAX0 266 aaPredicted RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 SLC2A12Q8TD20 617 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 WIPF2Q8TF74 440 aaPredicted RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 TRAPPC12Q8WVT3 735 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 VOPP1Q96AW1 172 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 REXO5Q96IC2 774 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 FCRL5Q96RD9 977 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 NPAS1Q99742 590 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 TM2D2Q9BX73 214 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 QTRT1Q9BXR0 403 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 ASNSD1Q9NWL6 643 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 SRP68Q9UHB9 627 aaKnown RBP3.3□□□□□ -1.88
GYPB-207ENST00000506679 B3GNT3Q9Y2A9 372 aa3.3□□□□□ -1.88
GYPB-207ENST00000506679 ZNF804BA4D1E1 1349 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 hCG_1642624A0A1W2PR95 340 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 FAM90A20PA6NIJ5 464 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 C3orf70A6NLC5 250 aaPredicted RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 E5RJQ4 531 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 RNF8O76064 485 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 HEXIM1O94992 359 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 SGPL1O95470 568 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 CYP21A2P08686 494 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 RFPL3SP0C7P2 107 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 RPS6KB1P23443 525 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 ATP5F1P24539 256 aaPredicted RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 HOXA7P31268 230 aaPredicted RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 YPEL5P62699 121 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 RBM6P78332 1123 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 MRPS21P82921 87 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 HSF1Q00613 529 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 SRSF4Q08170 494 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 PDCD2Q16342 344 aaPredicted RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 PFKFB3Q16875 520 aaPredicted RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 SUPT20HL1Q3ZLR7 823 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 GALNTL6Q49A17 601 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 ATPAF1Q5TC12 328 aaPredicted RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 SLC18B1Q6NT16 456 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 SLC39A5Q6ZMH5 540 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 DEF8Q6ZN54 512 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 RBM44Q6ZP01 1051 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 YTHDF3Q7Z739 585 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 MYCT1Q8N699 235 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 ZFPM2Q8WW38 1151 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 CELF1Q92879 486 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 FAM118BQ9BPY3 351 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 SH2D3AQ9BRG2 576 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 SORBS1Q9BX66 1292 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 PRSS22Q9GZN4 317 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 TWSG1Q9GZX9 223 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 ABHD16BQ9H3Z7 469 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 CCDC134Q9H6E4 229 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 ERVK-5Q9HDB9 667 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 LIN7CQ9NUP9 197 aaKnown RBP3.29□□□□□ -1.88
GYPB-207ENST00000506679 KLHL13Q9P2N7 655 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 RIPOR2Q9Y4F9 1068 aa3.29□□□□□ -1.88
GYPB-207ENST00000506679 EFCAB8A8MWE9 144 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 H0Y3Z8 333 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 TP73O15350 636 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 INPPL1O15357 1258 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 PIP5K1CO60331 668 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 NBNO60934 754 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 CNOT3O75175 753 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 CNTN5O94779 1100 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 PLAUP00749 431 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ALDOAP04075 364 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 ENO1P06733 434 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 SLC3A2P08195 630 aaKnown RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 PRR35P0CG20 571 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 VPS41P49754 854 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 SLC37A1P57057 533 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 DCTN1Q14203 1278 aa3.28□□□□□ -1.88
GYPB-207ENST00000506679 ZNF268Q14587 947 aaPredicted RBP3.28□□□□□ -1.88
GYPB-207ENST00000506679 POSTNQ15063 836 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms