RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TBC1D3IA0A087WXS9 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3EA0A087X179 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3KA0A087X1G2 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3BA6NDS4 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3FA6NER0 549 aaPredicted RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 AGAP5A6NIR3 686 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3LB9A6J9 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 FOXN1O15353 648 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 MBPP02686 304 aaPredicted RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 GCP02774 474 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 POLBP06746 335 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 HNRNPCP07910 306 aaKnown RBP eCLIP6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3HP0C7X1 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 RPL15P61313 204 aaKnown RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 RBM6P78332 1123 aaKnown RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 POU5F1BQ06416 359 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 FAM110CQ1W6H9 321 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3GQ6DHY5 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 DGAT2L7PQ6IED9 249 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3CQ6IPX1 549 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 LVRNQ6Q4G3 990 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 MMS22LQ6ZRQ5 1243 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TBC1D3Q8IZP1 549 aaPredicted RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 TMEM57Q8N5G2 664 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 OR52L2PQ8NGH6 319 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 MAFAQ8NHW3 353 aaPredicted RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 USP13Q92995 863 aaPredicted RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 HS6ST2Q96MM7 605 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 SNX18Q96RF0 628 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 NAP1L4Q99733 375 aaKnown RBP6.68□□□□□ -1.34
HERC4-213ENST00000506515 ELOVL1Q9BW60 279 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 TWSG1Q9GZX9 223 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 KCNK9Q9NPC2 374 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 G6PC2Q9NQR9 355 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 BAG5Q9UL15 447 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 PCDHA10Q9Y5I2 948 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 ADAMTSL3P82987 1691 aa6.68□□□□□ -1.34
HERC4-213ENST00000506515 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.67□□□□□ -1.34
HERC4-213ENST00000506515 ZNF213O14771 459 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 FYB1O15117 783 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 NKX2-8O15522 239 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 SH3BP5O60239 455 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 C1RP00736 705 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CYP21A2P08686 494 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 APEHP13798 732 aaKnown RBP6.67□□□□□ -1.34
HERC4-213ENST00000506515 GRK5P34947 590 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CDK7P50613 346 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CFHR3Q02985 330 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 SLC12A1Q13621 1099 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 SMAD1Q15797 465 aaKnown RBP6.67□□□□□ -1.34
HERC4-213ENST00000506515 AKNAD1Q5T1N1 836 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CCDC70Q6NSX1 233 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CEP85Q6P2H3 762 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 RINLQ6ZS11 566 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 BCDIN3DQ7Z5W3 292 aaKnown RBP6.67□□□□□ -1.34
HERC4-213ENST00000506515 GGNQ86UU5 652 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 LRRTM4Q86VH4 590 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CAGE1Q8TC20 777 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 ABHD16BQ9H3Z7 469 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CDCP1Q9H5V8 836 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 CPNE5Q9HCH3 593 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 ABHD10Q9NUJ1 306 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 GGA3Q9NZ52 723 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 FZD4Q9ULV1 537 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 LZTS1Q9Y250 596 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 KAT6AQ92794 2004 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 YEATS2Q9ULM3 1422 aa6.67□□□□□ -1.34
HERC4-213ENST00000506515 FAM90A20PA6NIJ5 464 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 RAMP2O60895 175 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 HEXIM1O94992 359 aaKnown RBP6.66□□□□□ -1.34
HERC4-213ENST00000506515 MATN1P21941 496 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 HSPA2P54652 639 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 MFSD13AQ14CX5 517 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 ERCC6LQ2NKX8 1250 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 TBRG1Q3YBR2 411 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 LRRC24Q50LG9 513 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 WDR93Q6P2C0 686 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 AMIGO2Q86SJ2 522 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 CPOQ8IVL8 374 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 ASB12Q8WXK4 309 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 DAZAP1Q96EP5 407 aaKnown RBP6.66□□□□□ -1.34
HERC4-213ENST00000506515 TRMT61AQ96FX7 289 aaKnown RBP6.66□□□□□ -1.34
HERC4-213ENST00000506515 TBATAQ96M53 351 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 ADGRE3Q9BY15 652 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 KRTAP4-2Q9BYR5 136 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 ASB6Q9NWX5 421 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 SH3BP4Q9P0V3 963 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 DERAQ9Y315 318 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 RRP7AQ9Y3A4 280 aaKnown RBP6.66□□□□□ -1.34
HERC4-213ENST00000506515 ENTPD2Q9Y5L3 495 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 FNDC1Q4ZHG4 1894 aaPredicted RBP6.66□□□□□ -1.34
HERC4-213ENST00000506515 AKNAQ7Z591 1439 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 MAGI2Q86UL8 1455 aa6.66□□□□□ -1.34
HERC4-213ENST00000506515 A0A087X1B8 175 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 CLIC1O00299 241 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 WDHD1O75717 1129 aaPredicted RBP6.65□□□□□ -1.34
HERC4-213ENST00000506515 MT-CO3P00414 261 aa6.65□□□□□ -1.34
HERC4-213ENST00000506515 TFRCP02786 760 aaKnown RBP6.65□□□□□ -1.34
HERC4-213ENST00000506515 DUSP1P28562 367 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms