RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ANKRD20A1Q5TYW2 823 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 POLNQ7Z5Q5 900 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 SAPCD2Q86UD0 394 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 KIF2BQ8N4N8 673 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 PCED1BQ96HM7 432 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ADAMTS5Q9UNA0 930 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 TULP2O00295 520 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 BUD23O43709 281 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 OPHN1O60890 802 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 SELPP16109 830 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 EDNRBP24530 442 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 RHOAP61586 193 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 SOWAHAQ2M3V2 549 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 MAP3K21Q5TCX8 1036 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 PTRHD1Q6GMV3 140 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 TTC27Q6P3X3 843 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 TPGS1Q6ZTW0 290 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 LRRC8DQ7L1W4 858 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 CALML6Q8TD86 181 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ERLEC1Q96DZ1 483 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ETNK2Q9NVF9 386 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 MYO5AQ9Y4I1 1855 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 LOC100653049A0A140TA62 436 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 NVLO15381 856 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 KRT34O76011 436 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 F2P00734 622 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 MYL2P10916 166 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 MPP3Q13368 585 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 KBTBD12Q3ZCT8 623 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ZNF618Q5T7W0 954 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 OTOP2Q7RTS6 562 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ZCCHC9Q8N567 271 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 NAT9Q9BTE0 207 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 TUBB6Q9BUF5 446 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 WWP1Q9H0M0 922 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 CNGB3Q9NQW8 809 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 SLC45A1Q9Y2W3 748 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 CDY1Q9Y6F8 540 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 NAV1Q8NEY1 1877 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 TRIM66O15016 1216 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ZWINTO95229 277 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 VAPBO95292 243 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 SYF2O95926 243 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ARHGEF7Q14155 803 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ARHGAP15Q53QZ3 475 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 TTMPQ5BVD1 217 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 OR52K1Q8NGK4 314 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ZNF558Q96NG5 402 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 VCXQ9H320 206 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 GTF2IRD1Q9UHL9 959 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 PAPSS1O43252 624 aaPredicted RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 ATP5C1P36542 298 aaKnown RBP14.47□□□□□ -0.09
TCOF1-207ENST00000504761 CPA2P48052 419 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 RENBPP51606 427 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 NUP93Q8N1F7 819 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 PYROXD2Q8N2H3 581 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 TMEM130Q8N3G9 435 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 DCUN1D1Q96GG9 259 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 SRRDQ9UH36 339 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 PTCH2Q9Y6C5 1203 aa14.47□□□□□ -0.09
TCOF1-207ENST00000504761 GOLGA8QA0A0J9YX86 632 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 GOLGA8OA6NCC3 632 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 PRR23AA6NEV1 266 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 GOLGA8NF8WBI6 632 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 RHOBTB1O94844 696 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 RTN3O95197 1032 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-207ENST00000504761 PURAQ00577 322 aaKnown RBP14.46□□□□□ -0.09
TCOF1-207ENST00000504761 FAAP100Q0VG06 881 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 RASGEF1CQ8N431 466 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.09
TCOF1-207ENST00000504761 BORCS6Q96GS4 357 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 B3GALT6Q96L58 329 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 FAM161BQ96MY7 647 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 NUF2Q9BZD4 464 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 CYP4F12Q9HCS2 524 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 SUN2Q9UH99 717 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 PCDHGC3Q9UN70 934 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 PKP3Q9Y446 797 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 FSCBQ5H9T9 825 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 USH1CQ9Y6N9 552 aa14.46□□□□□ -0.09
TCOF1-207ENST00000504761 ANKRD36CQ5JPF3 1778 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 TCF4P15884 667 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 HADHAP40939 763 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 TRPM8Q7Z2W7 1104 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 UROC1Q96N76 676 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 NEUROG2Q9H2A3 272 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 PHTF1Q9UMS5 762 aa14.46□□□□□ -0.1
TCOF1-207ENST00000504761 A8MX80 341 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 SERPINF2P08697 491 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 RPL17P18621 184 aaKnown RBP14.45□□□□□ -0.1
TCOF1-207ENST00000504761 MAXP61244 160 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 PSMD5Q16401 504 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 TIGD5Q53EQ6 642 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 THEMIS2Q5TEJ8 643 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
TCOF1-207ENST00000504761 TMA16Q96EY4 203 aaKnown RBP14.45□□□□□ -0.1
TCOF1-207ENST00000504761 FCRL2Q96LA5 508 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-207ENST00000504761 PSD3Q9NYI0 1048 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms