RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 FAM102AQ5T9C2 384 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SH2D5Q6ZV89 423 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 KRT27Q7Z3Y8 459 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF410Q86VK4 478 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 RTKN2Q8IZC4 609 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 ZNF786Q8N393 782 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 WDTC1Q8N5D0 677 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TMEM35BQ8NCS4 154 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 NKD2Q969F2 451 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 VTI1AQ96AJ9 217 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 DCPSQ96C86 337 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 PIWIL1Q96J94 861 aaKnown RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 DHRS4Q9BTZ2 278 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 Q9H521 79 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SOX17Q9H6I2 414 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 CISHQ9NSE2 258 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 TXNDC16Q9P2K2 825 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 SF3B1O75533 1304 aaKnown RBP eCLIP7.84□□□□□ -1.15
NEDD9-208ENST00000504387 NAV1Q8NEY1 1877 aa7.84□□□□□ -1.15
NEDD9-208ENST00000504387 ARHGEF37A1IGU5 675 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 GIPC1O14908 333 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 TNFAIP8O95379 198 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 METTL18O95568 372 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 GNL1P36915 607 aaPredicted RBP7.84□□□□□ -1.16
NEDD9-208ENST00000504387 AVPR1AP37288 418 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 NDST2P52849 883 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 ATXN1P54253 815 aaKnown RBP7.84□□□□□ -1.16
NEDD9-208ENST00000504387 HNRNPDQ14103 355 aaKnown RBP7.84□□□□□ -1.16
NEDD9-208ENST00000504387 IL23RQ5VWK5 629 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 C16orf87Q6PH81 154 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 GMCL1P1Q8NEA9 526 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 NLRP7Q8WX94 980 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 LRTOMTQ8WZ04 291 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 CMTM5Q96DZ9 223 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 THAP11Q96EK4 314 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 C7orf26Q96N11 449 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 CPXM1Q96SM3 734 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 APOL2Q9BQE5 337 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 TRIM8Q9BZR9 551 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 HAPLN2Q9GZV7 340 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 COQ10BQ9H8M1 238 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 TRNAU1APQ9NX07 287 aaKnown RBP7.84□□□□□ -1.16
NEDD9-208ENST00000504387 CYTH4Q9UIA0 394 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 COQ4Q9Y3A0 265 aa7.84□□□□□ -1.16
NEDD9-208ENST00000504387 DNAH12Q6ZR08 3092 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 K7ERI5 159 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 PDLIM1O00151 329 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 NRP1O14786 923 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SPTLC1O15269 473 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 RNASEH2AO75792 299 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 MT-ND1P03886 318 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 CCDC166P0CW27 439 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 RALBP11234 206 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 MPSTP25325 297 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 KLF10Q13118 480 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 TRPC3Q13507 836 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 ZACNQ401N2 412 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 GPR107Q5VW38 600 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 OR6B2Q6IFH4 312 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 RPS27LQ71UM5 84 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 PATL1Q86TB9 770 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SLC7A5P1Q8MH63 180 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 PLD6Q8N2A8 252 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 PARP8Q8N3A8 854 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 ZBTB8BQ8NAP8 495 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 AKT1S1Q96B36 256 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 ATG4CQ96DT6 458 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SLC39A3Q9BRY0 314 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SLC4A5Q9BY07 1137 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 EPS8L2Q9H6S3 715 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 FAM49BQ9NUQ9 324 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SIRPGQ9P1W8 387 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 EPS15L1Q9UBC2 864 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 RSL24D1Q9UHA3 163 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 USP18Q9UMW8 372 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 TMX2Q9Y320 296 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 MFHAS1Q9Y4C4 1052 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 DHX15O43143 795 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 STRNO43815 780 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 KLHL2O95198 593 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 APOEP02649 317 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 C4BPAP04003 597 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 GNAO1P09471 354 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 FGF3P11487 239 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 ALOX15P16050 662 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 EPHX2P34913 555 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 BNIP3Q12983 259 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 NEDD8Q15843 81 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SNRNP48Q6IEG0 339 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 AAGABQ6PD74 315 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 CAND1Q86VP6 1230 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 MAP4K3Q8IVH8 894 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 DSELQ8IZU8 1212 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 CCNYL1Q8N7R7 359 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 PNPLA1Q8N8W4 532 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 FAM47BQ8NA70 645 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 WNK4Q96J92 1243 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 MFSD14AQ96MC6 490 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 KLHL32Q96NJ5 620 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms