RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 DUSP22Q9NRW4 184 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 DLL3Q9NYJ7 618 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 MGAT4CQ9UBM8 478 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 AMFRQ9UKV5 643 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 ASAP1Q9ULH1 1129 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 DGKBQ9Y6T7 804 aa2.8□□□□□ -1.96
HMGB1P35-201ENST00000503360 CCDC189A1A4V9 331 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 HMX3A6NHT5 357 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 A8MVJ9 347 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 E5RJQ4 531 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRSS44E7EML9 344 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 H0YIZ8 118 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 M0R3H8 397 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 NPHP1O15259 732 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 CA12O43570 354 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMPRSS11DO60235 418 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PPP6R2O75170 966 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 BCAR3O75815 825 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 RPP40O75818 363 aaKnown RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 TJP3O95049 919 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PDE8BO95263 885 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 CER1O95813 267 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 FGAP02671 866 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 NPSP0C0P6 89 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 FPR3P25089 353 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 MCM5P33992 734 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 CCT5P48643 541 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 DGKQP52824 942 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PNLIPRP1P54315 467 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 EEFSECP57772 596 aaKnown RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 DEUP1Q05D60 604 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PPFIA1Q13136 1202 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 RABEP1Q15276 862 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 BTBD16Q32M84 506 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 TBC1D25Q3MII6 688 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 AASDHQ4L235 1098 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 HSP90AB4PQ58FF6 505 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PCID2Q5JVF3 399 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 L1TD1Q5T7N2 865 aaKnown RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 CCDC144NLQ6NUI1 221 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 MSANTD2Q6P1R3 559 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 SLC2A7Q6PXP3 512 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 Q6ZTC4 211 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PTCHD4Q6ZW05 846 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 SLC29A4Q7RTT9 530 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 KRT27Q7Z3Y8 459 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 SLC44A2Q8IWA5 706 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 SUGP1Q8IWZ8 645 aaKnown RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 ZBTB8BQ8NAP8 495 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 C8orf58Q8NAV2 365 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 NGDNQ8NEJ9 315 aaKnown RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 SCAMP5Q8TAC9 235 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 MCRS1Q96EZ8 462 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 LENG8Q96PV6 779 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 BRD8Q9H0E9 1235 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 PRDM8Q9NQV8 689 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 SRP68Q9UHB9 627 aaKnown RBP2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 ADAMTS5Q9UNA0 930 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 GPR52Q9Y2T5 361 aa2.79□□□□□ -1.96
HMGB1P35-201ENST00000503360 NOTCH3Q9UM47 2321 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 LY6G6EA0A0G2JKS1 128 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A18PA6NE21 464 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A16PA6NEW6 464 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A9PA6NNJ1 464 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A5PA8MXJ8 464 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 KIF28PB7ZC32 967 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 ZNF213O14771 459 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 IRAK2O43187 625 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 CTIFO43310 598 aaKnown RBP2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A15PP0C7V4 464 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A14PP0C7W9 464 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 MYCLP12524 364 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 ALADP13716 330 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 HSD3B1P14060 373 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 ADRA1DP25100 572 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 DIO1P49895 249 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 ARL4CP56559 192 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 PSG6Q00889 435 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 LMAN2Q12907 356 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 SEMA3BQ13214 749 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 KCNJ12Q14500 433 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 RALBP1Q15311 655 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 FAM90A2PQ658T7 463 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 DENND2CQ68D51 928 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 NFRKBQ6P4R8 1299 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 TMED8Q6PL24 325 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 MTHFD1LQ6UB35 978 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 NAPRTQ6XQN6 538 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 C9orf47Q6ZRZ4 202 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 RFX8Q6ZV50 586 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 RRAGAQ7L523 313 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 RAB11FIP2Q7L804 512 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 IRF2BP2Q7Z5L9 587 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 TRABD2AQ86V40 505 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 MOGAT3Q86VF5 341 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 ANKRD18AQ8IVF6 992 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 ADHFE1Q8IWW8 467 aa2.78□□□□□ -1.96
HMGB1P35-201ENST00000503360 CLASRPQ8N2M8 674 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms