RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SPATA4	Q8NEY3	305 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	PPP2R3C	Q969Q6	453 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	RPGRIP1	Q96KN7	1286 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	RNF157	Q96PX1	679 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	SLC22A12	Q96S37	553 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	NAP1L3	Q99457	506 aa	Predicted RBP	12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	CORO1B	Q9BR76	489 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	DHX35	Q9H5Z1	703 aa	Known RBP	12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	SFXN1	Q9H9B4	322 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	DOCK6	Q96HP0	2047 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	MYO9B	Q13459	2157 aa		12.59	□□□□□ -0.39
MATR3-231	ENST00000502394	CDH23	Q9H251	3354 aa		12.58	□□□□□ -0.39
MATR3-231	ENST00000502394	CCDC195	A0A1B0GUA6	201 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394		A0A1W2PRU2	124 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CTAGE15	A4D2H0	777 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	SOBP	A7XYQ1	873 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	GREM1	O60565	184 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	PAGE1	O75459	146 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CTAGE8	P0CG41	777 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	SLC2A3	P11169	496 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	KRT10	P13645	584 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CETN2	P41208	172 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	HCAR3	P49019	387 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	ZNF135	P52742	658 aa	Predicted RBP	12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	SLC7A9	P82251	487 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	DPYS	Q14117	519 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	COL19A1	Q14993	1142 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	LONRF2	Q1L5Z9	754 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	SLC5A9	Q2M3M2	681 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	ZNF697	Q5TEC3	545 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	PIK3R6	Q5UE93	754 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	TXNDC8	Q6A555	127 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	SLC9A4	Q6AI14	798 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CTAGE6	Q86UF2	777 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	MIB1	Q86YT6	1006 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CCDC50	Q8IVM0	306 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	MAP7D3	Q8IWC1	876 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CTAGE4	Q8IX94	777 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	ZNF683	Q8IZ20	524 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	PRELID2	Q8N945	189 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	C12orf50	Q8NA57	414 aa	Predicted RBP	12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	MNS1	Q8NEH6	495 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	PCDH19	Q8TAB3	1148 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	ADAMTS19	Q8TE59	1207 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	MAIP1	Q8WWC4	291 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	MRPS31	Q92665	395 aa	Known RBP	12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	WNT2B	Q93097	391 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	PLD4	Q96BZ4	506 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	TCEAL4	Q96EI5	215 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CSPG4P5	Q96PW8	444 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	RBM12	Q9NTZ6	932 aa	Known RBP	12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	CWC15	Q9P013	229 aa	Known RBP	12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	XPO7	Q9UIA9	1087 aa	Known RBP	12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	TRIOBP	Q9H2D6	2365 aa		12.58	□□□□□ -0.4
MATR3-231	ENST00000502394	SOX1	O00570	391 aa	Predicted RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	STC2	O76061	302 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	MYL4	P12829	197 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	GOT1	P17174	413 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	GJA1	P17302	382 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	DDX6	P26196	483 aa	Known RBP eCLIP	12.57	□□□□□ -0.4	2e-6	■□□□□ 10.8
MATR3-231	ENST00000502394	HTR7	P34969	479 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	KCNQ1	P51787	676 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	MLLT6	P55198	1093 aa	Predicted RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	NTHL1	P78549	312 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	COG7	P83436	770 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ZXDB	P98169	803 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	MTA1	Q13330	715 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ADAM15	Q13444	863 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ADGRE1	Q14246	886 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	KRT81	Q14533	505 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	GRIN2C	Q14957	1233 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	LLGL1	Q15334	1064 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	CTC1	Q2NKJ3	1217 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ANKRD20A8P	Q5CZ79	823 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ZFYVE27	Q5T4F4	411 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	STXBP5	Q5T5C0	1151 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	NUGGC	Q68CJ6	796 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	SYCE2	Q6PIF2	218 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	PDZD4	Q76G19	769 aa	Predicted RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	MMGT1	Q8N4V1	131 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	PLD5	Q8N7P1	536 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	C12orf76	Q8N812	135 aa	Predicted RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	NOA1	Q8NC60	698 aa	Known RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	WBP2	Q969T9	261 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	AZIN2	Q96A70	460 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	BTN2A3P	Q96KV6	586 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	C1orf74	Q96LT6	269 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	PRMT1	Q99873	361 aa	Known RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	HEMGN	Q9BXL5	484 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	CALN1	Q9BXU9	219 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	SLC46A2	Q9BY10	475 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	ATXN3L	Q9H3M9	355 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	PRDM12	Q9H4Q4	367 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	PRDM16	Q9HAZ2	1276 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	SNX10	Q9Y5X0	201 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	HS3ST4	Q9Y661	456 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	MTCH2	Q9Y6C9	303 aa		12.57	□□□□□ -0.4
MATR3-231	ENST00000502394	IGLV3-10	A0A075B6K4	115 aa		12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms