RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 MPPE1Q53F39 396 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 ADIPOR2Q86V24 386 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 FMNL3Q8IVF7 1028 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 PDCD7Q8N8D1 485 aaKnown RBP15.35■□□□□ 0.05
TRAF4-212ENST00000498540 SLC4A11Q8NBS3 891 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 ULBP1Q9BZM6 244 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 BTBD1Q9H0C5 482 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 PRSS16Q9NQE7 514 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 ABCB8Q9NUT2 735 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 PLA2G4CQ9UP65 541 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 TRAF3IP3Q9Y228 551 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 COL5A1P20908 1838 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-212ENST00000498540 HELZ2Q9BYK8 2649 aaKnown RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 EIF4E1BA6NMX2 242 aaKnown RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 TULP2O00295 520 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 CALUO43852 315 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 ZIC2O95409 532 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 ZBED1O96006 694 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 NR2F2P24468 414 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 RAD23BP54727 409 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 CLDN6P56747 220 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 INTS8Q75QN2 995 aaKnown RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 KIAA0907Q7Z7F0 614 aaPredicted RBP15.34■□□□□ 0.05
TRAF4-212ENST00000498540 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.052e-10■□□□□ 9.7
TRAF4-212ENST00000498540 WFDC5Q8TCV5 224 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 SEMA4DQ92854 862 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 TMEM176AQ96HP8 235 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 DCBLD2Q96PD2 775 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 CISHQ9NSE2 258 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 FTSJ1Q9UET6 329 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 SFMBT1Q9UHJ3 866 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 GGA2Q9UJY4 613 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 SHROOM3Q8TF72 1996 aa15.34■□□□□ 0.05
TRAF4-212ENST00000498540 PLK4O00444 970 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 PAPSS1O43252 624 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-212ENST00000498540 MSI1O43347 362 aaKnown RBP15.33■□□□□ 0.04
TRAF4-212ENST00000498540 DNTTP04053 509 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 IGHV4-34P06331 123 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 PABPC1P11940 636 aaKnown RBP15.33■□□□□ 0.04
TRAF4-212ENST00000498540 HARS2P49590 506 aaKnown RBP15.33■□□□□ 0.04
TRAF4-212ENST00000498540 BCAT1P54687 386 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 ZBTB16Q05516 673 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 PDE4CQ08493 712 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 ARHGAP17Q68EM7 881 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 PM20D1Q6GTS8 502 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 ADAT2Q7Z6V5 191 aaKnown RBP15.33■□□□□ 0.04
TRAF4-212ENST00000498540 FAM186BQ8IYM0 893 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 AHI1Q8N157 1196 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 ANKRD52Q8NB46 1076 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 CCDC150Q8NCX0 1101 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 PIP4K2CQ8TBX8 421 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 EDEM1Q92611 657 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 DNAI2Q9GZS0 605 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 MTG2Q9H4K7 406 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 FBRSQ9HAH7 460 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 TMEM8AQ9HCN3 771 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 STOML2Q9UJZ1 356 aa15.33■□□□□ 0.04
TRAF4-212ENST00000498540 NYNRINQ9P2P1 1898 aaKnown RBP15.33■□□□□ 0.04
TRAF4-212ENST00000498540 CBX4O00257 560 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 PRB1P04280 392 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 DLDP09622 509 aaKnown RBP15.32■□□□□ 0.04
TRAF4-212ENST00000498540 KRT13P13646 458 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 CD70P32970 193 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 ABCG1P45844 678 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 NFIL3Q16649 462 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 GOLGA7BQ2TAP0 167 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-212ENST00000498540 PRAMEF14Q5SWL7 426 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 ADGRF1Q5T601 910 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 ZNF776Q68DI1 518 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-212ENST00000498540 GATAD2AQ86YP4 633 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 ENGASEQ8NFI3 743 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 TMA16Q96EY4 203 aaKnown RBP15.32■□□□□ 0.04
TRAF4-212ENST00000498540 SLC6A18Q96N87 628 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 SGK2Q9HBY8 427 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 OLA1Q9NTK5 396 aaKnown RBP15.32■□□□□ 0.04
TRAF4-212ENST00000498540 SERGEFQ9UGK8 458 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 MAPK8IP1Q9UQF2 711 aa15.32■□□□□ 0.04
TRAF4-212ENST00000498540 HBS1LQ9Y450 684 aaKnown RBP15.32■□□□□ 0.04
TRAF4-212ENST00000498540 MYLKQ15746 1914 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 A0A1B0GTQ1 180 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 FAM47DPA6NHR8 397 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 YJEFN3A6XGL0 299 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 E7ENQ6 273 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 F13A1P00488 732 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 ITPKBP27987 946 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 ZNF445P59923 1031 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 ADIGQ0VDE8 80 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 INAVAQ3KP66 663 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 KIAA0895LQ68EN5 471 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 KRT39Q6A163 491 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 RFWD3Q6PCD5 774 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 TMPRSS12Q86WS5 348 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 TATDN2Q93075 761 aa15.31■□□□□ 0.04
TRAF4-212ENST00000498540 MYO19Q96H55 970 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms