RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 MPP7Q5T2T1 576 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 NADSYN1Q6IA69 706 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 MMS22LQ6ZRQ5 1243 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 SND1Q7KZF4 910 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■□□□□ 10.1
HSPG2-213ENST00000498495 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 IRF2BP2Q7Z5L9 587 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 WDR5BQ86VZ2 330 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 CCDC117Q8IWD4 279 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-213ENST00000498495 CHPFQ8IZ52 775 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 UCMAQ8WVF2 138 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 BAP1Q92560 729 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 BTN2A3PQ96KV6 586 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 NPY6RQ99463 290 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 WDCPQ9H6R7 721 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 STIM2Q9P246 746 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 LRRC53A6NM62 1247 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 GFRA2O00451 464 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 AXIN1O15169 862 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 ZBTB24O43167 697 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-213ENST00000498495 HRO43593 1189 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 TIMM44O43615 452 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 F9P00740 461 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 WASP42768 502 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 SGSHP51688 502 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 DEUP1Q05D60 604 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 MTA1Q13330 715 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-213ENST00000498495 E2F5Q15329 346 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 ASIC2Q16515 512 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 SFMBT2Q5VUG0 894 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 EGFLAMQ63HQ2 1017 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 RAP1GAP2Q684P5 730 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 ANKS1BQ7Z6G8 1248 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 PHLDB2Q86SQ0 1253 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 CHSY1Q86X52 802 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 LGI2Q8N0V4 545 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 ZNF557Q8N988 423 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-213ENST00000498495 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-213ENST00000498495 C11orf70Q9BRQ4 267 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 NUCKS1Q9H1E3 243 aaKnown RBP13.27□□□□□ -0.29
HSPG2-213ENST00000498495 TMEM51Q9NW97 253 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 ADAM22Q9P0K1 906 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 IFNKQ9P0W0 207 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 EBF1Q9UH73 591 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 XPO7Q9UIA9 1087 aaKnown RBP13.27□□□□□ -0.29
HSPG2-213ENST00000498495 TMEM59LQ9UK28 342 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 HCN2Q9UL51 889 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
HSPG2-213ENST00000498495 F5H5T6 163 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 ADAM23O75077 832 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 CALB1P05937 261 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 TPM3P06753 285 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 HOXB2P14652 356 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
HSPG2-213ENST00000498495 TACR2P21452 398 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 HLA-FP30511 346 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 RPS24P62847 133 aaKnown RBP13.26□□□□□ -0.29
HSPG2-213ENST00000498495 CENPCQ03188 943 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 FIGNQ5HY92 759 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 ANO7Q6IWH7 933 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 PRR23BQ6ZRT6 265 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 CEP68Q76N32 757 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 ARCQ7LC44 396 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 PHF13Q86YI8 300 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-213ENST00000498495 MFN1Q8IWA4 741 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 CFAP52Q8N1V2 620 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 PGBD3Q8N328 593 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 CARNMT1Q8N4J0 409 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 SUMF1Q8NBK3 374 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 ACOX2Q99424 681 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 CIPCQ9C0C6 399 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 EPC1Q9H2F5 836 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 METTL5Q9NRN9 209 aaKnown RBP13.26□□□□□ -0.29
HSPG2-213ENST00000498495 ELOVL2Q9NXB9 296 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 AIPL1Q9NZN9 384 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 PAXBP1Q9Y5B6 917 aa13.26□□□□□ -0.29
HSPG2-213ENST00000498495 H0Y626 953 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 NPC1O15118 1278 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 RPP40O75818 363 aaKnown RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 CHRM1P11229 460 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 PABPC1P11940 636 aaKnown RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 KRT3P12035 628 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 FLT3P36888 993 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 CXCR3P49682 368 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 SRSF5Q13243 272 aaKnown RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 EIF4HQ15056 248 aaKnown RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
HSPG2-213ENST00000498495 BRMS1LQ5PSV4 323 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 ACAD10Q6JQN1 1059 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 CHST9Q7L1S5 443 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 AHI1Q8N157 1196 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 EMC1Q8N766 993 aa13.25□□□□□ -0.29
HSPG2-213ENST00000498495 FIBINQ8TAL6 211 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms