RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	SNRNP25	Q9BV90	132 aa	Known RBP	15.4	■□□□□ 0.06
UMPS-209	ENST00000497791	HPS4	Q9NQG7	708 aa		15.4	■□□□□ 0.06
UMPS-209	ENST00000497791	TSPAN3	O60637	253 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	APOE	P02649	317 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	GDI1	P31150	447 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	MAN1A1	P33908	653 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	PCK1	P35558	622 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	MARCKSL1	P49006	195 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	IRAK1	P51617	712 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	EML3	Q32P44	896 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	ARHGAP29	Q52LW3	1261 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	MS4A13	Q5J8X5	152 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	C11orf63	Q6NUN7	778 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	UNC45B	Q8IWX7	931 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	OSCP1	Q8WVF1	389 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	BHMT	Q93088	406 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	BTN2A3P	Q96KV6	586 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	PRICKLE1	Q96MT3	831 aa	Predicted RBP	15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	PRMT1	Q99873	361 aa	Known RBP	15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	FAM83C	Q9BQN1	747 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	TSGA10	Q9BZW7	698 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	SIK2	Q9H0K1	926 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	EBF3	Q9H4W6	596 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	KLHL11	Q9NVR0	708 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	DUS2	Q9NX74	493 aa	Known RBP	15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	PRKAG3	Q9UGI9	489 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	LSM7	Q9UK45	103 aa	Known RBP	15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	FZD10	Q9ULW2	581 aa		15.39	■□□□□ 0.05
UMPS-209	ENST00000497791	ARNTL	O00327	626 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	GFRA2	O00451	464 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	FTCD	O95954	541 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	ACAP1	Q15027	740 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	SLFN11	Q7Z7L1	901 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	CIR1	Q86X95	450 aa	Predicted RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	TMEM25	Q86YD3	366 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	FAM217A	Q8IXS0	508 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	TXLNB	Q8N3L3	684 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	ATP6V0D2	Q8N8Y2	350 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	KIAA1524	Q8TCG1	905 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	DCLK3	Q9C098	648 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	STOML2	Q9UJZ1	356 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	PACSIN2	Q9UNF0	486 aa	Predicted RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	MYO18A	Q92614	2054 aa	Known RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	PRPSAP2	O60256	369 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	RARA	P10276	462 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	TACR2	P21452	398 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	SLC11A2	P49281	568 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	AUH	Q13825	339 aa	Known RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	ADGRF1	Q5T601	910 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	NAIF1	Q69YI7	327 aa	Predicted RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	RHBDF2	Q6PJF5	856 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	TPGS1	Q6ZTW0	290 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	ZNF683	Q8IZ20	524 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	ADGRG2	Q8IZP9	1017 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	DEPDC1B	Q8WUY9	529 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	HSPH1	Q92598	858 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	KRT35	Q92764	455 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	CD101	Q93033	1021 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	NTAN1	Q96AB6	310 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	E2F7	Q96AV8	911 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	KCTD15	Q96SI1	283 aa	Predicted RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	TRMT61B	Q9BVS5	477 aa	Known RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	DHX35	Q9H5Z1	703 aa	Known RBP	15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	GTSE1	Q9NYZ3	720 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	VANGL2	Q9ULK5	521 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	AP4E1	Q9UPM8	1137 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	NEU3	Q9UQ49	428 aa		15.38	■□□□□ 0.05
UMPS-209	ENST00000497791	ZSCAN12	O43309	604 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	SPOP	O43791	374 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	CYP17A1	P05093	508 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	CD48	P09326	243 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	SLC2A3	P11169	496 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	SCAP	Q12770	1279 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	LY6G5C	Q5SRR4	150 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	ERMARD	Q5T6L9	678 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	CHSY1	Q86X52	802 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	YAF2	Q8IY57	180 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	CFAP52	Q8N1V2	620 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	RNF10	Q8N5U6	811 aa	Known RBP	15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	IGSF8	Q969P0	613 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	AZIN2	Q96A70	460 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	CHFR	Q96EP1	664 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	PLK2	Q9NYY3	685 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	IGSF9	Q9P2J2	1179 aa		15.37	■□□□□ 0.05
UMPS-209	ENST00000497791	KIAA1549L	Q6ZVL6	1849 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	CHD5	Q8TDI0	1954 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	CHAD	O15335	359 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	SOX9	P48436	509 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	IFNAR2	P48551	515 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	MLLT6	P55198	1093 aa	Predicted RBP	15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	RPS24	P62847	133 aa	Known RBP	15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	GAB4	Q2WGN9	574 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	FBXL22	Q6P050	247 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	NT5DC3	Q86UY8	548 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	RNF135	Q8IUD6	432 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	LGI2	Q8N0V4	545 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	HAPLN3	Q96S86	360 aa		15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	15.36	■□□□□ 0.05
UMPS-209	ENST00000497791	SLC12A6	Q9UHW9	1150 aa		15.36	■□□□□ 0.05

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms