RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 VPS50Q96JG6 964 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 KLC2Q9H0B6 622 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 EPS8L2Q9H6S3 715 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 PRDM16Q9HAZ2 1276 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 COX16Q9P0S2 106 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 AP4E1Q9UPM8 1137 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 GPC6Q9Y625 555 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 MICAL3Q7RTP6 2002 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 SPATA31A1Q5TZJ5 1347 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 CFAP99D6REC4 459 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 GOLGA8TH3BQL2 631 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 AP3B1O00203 1094 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 RNASEH2AO75792 299 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 MT-ND1P03886 318 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 ITGAVP06756 1048 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 PIK3R1P27986 724 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 RBL1P28749 1068 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 XIAPP98170 497 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 TFAMQ00059 246 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 MS4A2Q01362 244 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 PLCL1Q15111 1095 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 RGS21Q2M5E4 152 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 PGS1Q32NB8 556 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 PDCD4Q53EL6 469 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 METTL21CQ5VZV1 264 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 RELL1Q8IUW5 271 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 MPP5Q8N3R9 675 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 SREK1Q8WXA9 508 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZBTB45Q96K62 511 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 SLX1AQ9BQ83 275 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 CCDC90BQ9GZT6 254 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 NAA50Q9GZZ1 169 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 SOX17Q9H6I2 414 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 NOL6Q9H6R4 1146 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 CXorf21Q9HAI6 301 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 DDX56Q9NY93 547 aaKnown RBP10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 RAB26Q9ULW5 256 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 TBX20Q9UMR3 447 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 ATP11BQ9Y2G3 1177 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 PCDHAC2Q9Y5I4 1007 aa10.91□□□□□ -0.66
TRAPPC12-223ENST00000497597 MYO18AQ92614 2054 aaKnown RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 H3BNX3 289 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 PLOD2O00469 737 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 ESRRBO95718 433 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 TMEM191BP0C7N4 346 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 AOC1P19801 751 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 BCAR1P56945 870 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 TGFBIQ15582 683 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 FAM182BQ5T319 152 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 OGFRL1Q5TC84 451 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 WDR78Q5VTH9 848 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 ADNPQ9H2P0 1102 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 SSU72Q9NP77 194 aaKnown RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 GTSE1Q9NYZ3 720 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 PHRF1Q9P1Y6 1649 aaKnown RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 H6PDO95479 791 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 SERPINE1P05121 402 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 DHRS4L1P0CG22 281 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 NPTX2P47972 431 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 RARRES1P49788 294 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 CDK9P50750 372 aaKnown RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 SLC18A2Q05940 514 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 CYP24A1Q07973 514 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZBTB17Q13105 803 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 CUL2Q13617 745 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZNF618Q5T7W0 954 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 TEDDM1Q5T9Z0 273 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 C16orf89Q6UX73 402 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 SIX6OS1Q8N1H7 587 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 GPD1LQ8N335 351 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 TDRD5Q8NAT2 981 aaKnown RBP10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 BPIFB6Q8NFQ5 453 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 CDKL2Q92772 493 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 TSNARE1Q96NA8 513 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 ITGA11Q9UKX5 1188 aa10.9□□□□□ -0.66
TRAPPC12-223ENST00000497597 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 SERPINB7O75635 380 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 ZBTB7AO95365 584 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 CPA3P15088 417 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 ATP2B4P23634 1241 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 CYP3A7P24462 503 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 MPSTP25325 297 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 QARSP47897 775 aaKnown RBP10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 KBTBD6Q86V97 674 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 MZB1Q8WU39 189 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 BORCS5Q969J3 196 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 TAMM41Q96BW9 452 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 CLIP3Q96DZ5 547 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 CENPOQ9BU64 300 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 HERC2P3Q9BVR0 1158 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 MARCH7Q9H992 704 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 PRR12Q9ULL5 1215 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 DRG1Q9Y295 367 aaKnown RBP10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 TTLL3Q9Y4R7 772 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 AP4S1Q9Y587 144 aa10.9□□□□□ -0.67
TRAPPC12-223ENST00000497597 WDR27A2RRH5 827 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms