RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 USP37Q86T82 979 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 HACE1Q8IYU2 909 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 EIF2AQ9BY44 585 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 KLC2Q9H0B6 622 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
GAPVD1-220ENST00000497580 WNK3Q9BYP7 1800 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CLIC3O95833 236 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 TMEM191BP0C7N4 346 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CEACAM7Q14002 265 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 MYBPC2Q14324 1141 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 ATG14Q6ZNE5 492 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CHST15Q7LFX5 561 aaPredicted RBP13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 C14orf80Q86SX3 495 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 PCDH20Q8N6Y1 951 aaKnown RBP13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 UBR7Q8N806 425 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 BIRC8Q96P09 236 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 PCDHAC1Q9H158 963 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 DAPK2Q9UIK4 370 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 FGF3P11487 239 aaPredicted RBP13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 IL1R2P27930 398 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 PIK3R1P27986 724 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 AOC3Q16853 763 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 RGS21Q2M5E4 152 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 MGAT5BQ3V5L5 792 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 TMEM198Q66K66 360 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 SCARA5Q6ZMJ2 495 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF781Q8N8C0 355 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 SCAIQ8N9R8 606 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 RANBP9Q96S59 729 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 TPP1O14773 563 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 GH2P01242 217 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 SERPINE1P05121 402 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 RALBP11234 206 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF182P17025 639 aaPredicted RBP13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 NR4A1P22736 598 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 MAP4P27816 1152 aaKnown RBP13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 ABCG1P45844 678 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CTBSQ01459 385 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CYP24A1Q07973 514 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 AARS2Q5JTZ9 985 aaKnown RBP13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 C16orf89Q6UX73 402 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 NPAS2Q99743 824 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 SLC29A1Q99808 456 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CXorf21Q9HAI6 301 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 ZHX2Q9Y6X8 837 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 NFASCO94856 1347 aa13.42□□□□□ -0.26
GAPVD1-220ENST00000497580 CNOT3O75175 753 aaKnown RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 CD19P15391 556 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ME2P23368 584 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 GCNT1Q02742 428 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 SEZ6Q53EL9 994 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 GALNT18Q6P9A2 607 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 LAYNQ6UX15 382 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 GPR180Q86V85 440 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 MPP5Q8N3R9 675 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 KBTBD7Q8WVZ9 684 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 TAMM41Q96BW9 452 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 WDR41Q9HAD4 459 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 MAGED2Q9UNF1 606 aaPredicted RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 EXOC7Q9UPT5 735 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 IGKV6D-41A0A0C4DH26 115 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 CFAP99D6REC4 459 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 H3BNH8 94 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ARRB2P32121 409 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 CRHR1P34998 444 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ZNF829Q3KNS6 432 aaPredicted RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ZFP1Q6P2D0 407 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 UNC5AQ6ZN44 842 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 CHERPQ8IWX8 916 aaKnown RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 MAPK15Q8TD08 544 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 WNK4Q96J92 1243 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 RTKNQ9BST9 563 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 NOL11Q9H8H0 719 aaKnown RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 CLK4Q9HAZ1 481 aaKnown RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 TCF7L2Q9NQB0 619 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 PNPLA3Q9NST1 481 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 DDX56Q9NY93 547 aaKnown RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 TJP2Q9UDY2 1190 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 BCAP29Q9UHQ4 241 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 APOEP02649 317 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 S100BP04271 92 aaPredicted RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 RARRES1P49788 294 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 GABPAQ06546 454 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 SLC10A2Q12908 348 aaPredicted RBP13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 CDO1Q16878 200 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ZBTB49Q6ZSB9 765 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 ARCQ7LC44 396 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 SNX29P2Q8IUI4 249 aa13.41□□□□□ -0.26
GAPVD1-220ENST00000497580 FIBCD1Q8N539 461 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms