RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 RIN3Q8TB24 985 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 CENPIQ92674 756 aaPredicted RBP20.8■□□□□ 0.92
CTSD-206ENST00000497544 WBP2Q969T9 261 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 BTBD6Q96KE9 485 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 NCAPGQ9BPX3 1015 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 PIGVQ9NUD9 493 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 DUS2Q9NX74 493 aaKnown RBP20.8■□□□□ 0.92
CTSD-206ENST00000497544 LCMT1Q9UIC8 334 aa20.8■□□□□ 0.92
CTSD-206ENST00000497544 A0A0A6YYK5 440 aaPredicted RBP20.79■□□□□ 0.92
CTSD-206ENST00000497544 RCCD1A6NED2 376 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 SCAMP3O14828 347 aaKnown RBP20.79■□□□□ 0.92
CTSD-206ENST00000497544 PJA2O43164 708 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 IGLV3-27P01718 113 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 CCDC175P0C221 793 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 GDI1P31150 447 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 SLC11A2P49281 568 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 CXCR3P49682 368 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 NAP1L1P55209 391 aaKnown RBP20.79■□□□□ 0.92
CTSD-206ENST00000497544 PPP2R5DQ14738 602 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 TCEAL1Q15170 157 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 BRMS1LQ5PSV4 323 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 OTUD1Q5VV17 481 aaPredicted RBP20.79■□□□□ 0.92
CTSD-206ENST00000497544 SCYL2Q6P3W7 929 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 BNIPLQ7Z465 357 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 ADAM33Q9BZ11 813 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 LACRTQ9GZZ8 138 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 KCNF1Q9H3M0 494 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 CALCOCO1Q9P1Z2 691 aa20.79■□□□□ 0.92
CTSD-206ENST00000497544 CHADO15335 359 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 MTA2O94776 668 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 MOCS2O96007 188 aaPredicted RBP20.78■□□□□ 0.92
CTSD-206ENST00000497544 KLKB1P03952 638 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 ATXN1P54253 815 aaKnown RBP20.78■□□□□ 0.92
CTSD-206ENST00000497544 FCHO2Q0JRZ9 810 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 MTA1Q13330 715 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 MESDQ14696 234 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 RSPO4Q2I0M5 234 aaPredicted RBP20.78■□□□□ 0.92
CTSD-206ENST00000497544 ARL13BQ3SXY8 428 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 BBS7Q8IWZ6 715 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 AZIN2Q96A70 460 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 OTUB2Q96DC9 234 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 MFSD1Q9H3U5 465 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 BRD9Q9H8M2 597 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 AGO1Q9UL18 857 aaKnown RBP20.78■□□□□ 0.92
CTSD-206ENST00000497544 WNT6Q9Y6F9 365 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 FANCMQ8IYD8 2048 aa20.78■□□□□ 0.92
CTSD-206ENST00000497544 TMEM110-MUSTN1A8MSY1 372 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 BTNL10A8MVZ5 291 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 ACSL4O60488 711 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 GREM1O60565 184 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 ARHGAP25P42331 645 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 HDAC4P56524 1084 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 ZNF252P-AS1Q0IIN9 211 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 TDGQ13569 410 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 PDGFRLQ15198 375 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 Q6ZNB5 142 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 FAM131BQ86XD5 332 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 CCDC105Q8IYK2 499 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 OSCP1Q8WVF1 389 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 ZFYVE19Q96K21 471 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 BTN2A3PQ96KV6 586 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 DDX50Q9BQ39 737 aaKnown RBP20.77■□□□□ 0.92
CTSD-206ENST00000497544 TSGA10Q9BZW7 698 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 TKTL2Q9H0I9 626 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 LINC00597Q9H2U6 94 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 SEMA4AQ9H3S1 761 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 DUSP10Q9Y6W6 482 aa20.77■□□□□ 0.92
CTSD-206ENST00000497544 KCNU1A8MYU2 1149 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 PI15O43692 258 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 KRT86O43790 486 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 PROSCO94903 275 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 LATS1O95835 1130 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 CHKAP35790 457 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 HADHBP55084 474 aaKnown RBP20.76■□□□□ 0.91
CTSD-206ENST00000497544 IFI16Q16666 785 aaKnown RBP20.76■□□□□ 0.91
CTSD-206ENST00000497544 RAB6CQ53S08 254 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 NIPA2Q8N8Q9 360 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 IRF7Q92985 503 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 CALR3Q96L12 384 aaKnown RBP20.76■□□□□ 0.91
CTSD-206ENST00000497544 FAM83CQ9BQN1 747 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 RAB6CQ9H0N0 254 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 ARHGEF38Q9NXL2 777 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 MYOFQ9NZM1 2061 aa20.76■□□□□ 0.91
CTSD-206ENST00000497544 BUB1O43683 1085 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 PRPSAP2O60256 369 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 ADRA1BP35368 520 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 SSR1P43307 286 aaKnown RBP20.75■□□□□ 0.91
CTSD-206ENST00000497544 ADGRF1Q5T601 910 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 ADGRG2Q8IZP9 1017 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 DCLK2Q8N568 766 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 HINFPQ9BQA5 517 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 PCSK1NQ9UHG2 260 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 PPP2R2CQ9Y2T4 447 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 R4GN57 208 aa20.75■□□□□ 0.91
CTSD-206ENST00000497544 LRCH4O75427 683 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 MIPP30301 263 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 PCK1P35558 622 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 NR1H3Q13133 447 aa20.74■□□□□ 0.91
CTSD-206ENST00000497544 HADHQ16836 314 aaKnown RBP20.74■□□□□ 0.91
CTSD-206ENST00000497544 EML3Q32P44 896 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms