RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 NYNRINQ9P2P1 1898 aaKnown RBP16.33■□□□□ 0.21
HDAC4-213ENST00000496347 GDF9O60383 454 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 PABPC1P11940 636 aaKnown RBP16.33■□□□□ 0.2
HDAC4-213ENST00000496347 IL12RB1P42701 662 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 DHPSP49366 369 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-213ENST00000496347 ARID5AQ03989 594 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 ZNF234Q14588 700 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 FUT11Q495W5 492 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 HSP90AA4PQ58FG1 418 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 LYSMD4Q5XG99 296 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 SERPINA13PQ6UXR4 307 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 SLC47A2Q86VL8 602 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 GPT2Q8TD30 523 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 PPP1R13BQ96KQ4 1090 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 EDEM2Q9BV94 578 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 EVLQ9UI08 416 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-213ENST00000496347 GGA2Q9UJY4 613 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 ACACBO00763 2458 aa16.33■□□□□ 0.2
HDAC4-213ENST00000496347 IGHV1OR15-9A0A0B4J2B8 117 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 LNP1A1A4G5 178 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 PES1O00541 588 aaKnown RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SYNCRIPO60506 623 aaKnown RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 TSPAN3O60637 253 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 MBD3O95983 291 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SLC6A4P31645 630 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 KRT9P35527 623 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SGSHP51688 502 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 RPL6Q02878 288 aaKnown RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 MTA1Q13330 715 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 CDKAL1Q5VV42 579 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SYPL2Q5VXT5 272 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 PEAR1Q5VY43 1037 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 TMEM215Q68D42 235 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 IL31Q6EBC2 164 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 NADSYN1Q6IA69 706 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 TCEAL6Q6IPX3 200 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 DPY19L2P1Q6NXN4 242 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 RFWD3Q6PCD5 774 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 OLFML1Q6UWY5 402 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 KIAA0907Q7Z7F0 614 aaPredicted RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 METTL3Q86U44 580 aaKnown RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SYT12Q8IV01 421 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 C1orf131Q8NDD1 294 aaKnown RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 ADAM32Q8TC27 787 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 TCEAL3Q969E4 200 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 BTN2A3PQ96KV6 586 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SLC2A13Q96QE2 648 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SMOC1Q9H4F8 434 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 FAM204AQ9H8W3 233 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 SAMSN1Q9NSI8 373 aaKnown RBP16.32■□□□□ 0.2
HDAC4-213ENST00000496347 ABCB8Q9NUT2 735 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 CEP295Q9C0D2 2601 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 CHD8Q9HCK8 2581 aa16.32■□□□□ 0.2
HDAC4-213ENST00000496347 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 FOXN3O00409 490 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 KHNYNO15037 678 aaKnown RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 TBL1XO60907 577 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 TRUB2O95900 331 aaKnown RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 TPM2P07951 284 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 SLC2A3P11169 496 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 UCHL3P15374 230 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 PRKCHP24723 683 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 CLCN1P35523 988 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 PTGER3P43115 390 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 CDH18Q13634 790 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 STPG1Q5TH74 334 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 KLHDC7AQ5VTJ3 777 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 KIAA1324Q6UXG2 1013 aaKnown RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 C11orf57Q6ZUT1 292 aaPredicted RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 RABEPKQ7Z6M1 372 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 ADIPOR2Q86V24 386 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 ZDHHC17Q8IUH5 632 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 MFN1Q8IWA4 741 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 TMEFF1Q8IYR6 380 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 LSM14BQ9BX40 385 aaKnown RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 NUCKS1Q9H1E3 243 aaKnown RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 SYNCQ9H7C4 482 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 PRDM16Q9HAZ2 1276 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 PLCB1Q9NQ66 1216 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 USP36Q9P275 1121 aaKnown RBP16.31■□□□□ 0.2
HDAC4-213ENST00000496347 TJP2Q9UDY2 1190 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
HDAC4-213ENST00000496347 MED19A0JLT2 244 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 WASH3PC4AMC7 463 aa16.3■□□□□ 0.2
HDAC4-213ENST00000496347 F8VZ95 297 aa16.3■□□□□ 0.2
HDAC4-213ENST00000496347 DAB1O75553 588 aa16.3■□□□□ 0.2
HDAC4-213ENST00000496347 LSM8O95777 96 aaKnown RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 MOCS2O96007 188 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 ATP5BP06576 529 aaKnown RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 PNMA6AP0CW24 399 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 C7P10643 843 aa16.3■□□□□ 0.2
HDAC4-213ENST00000496347 CYP11B1P15538 503 aa16.3■□□□□ 0.2
HDAC4-213ENST00000496347 CDH5P33151 784 aaPredicted RBP16.3■□□□□ 0.2
HDAC4-213ENST00000496347 CDK17Q00537 523 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms