RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 IGHV1OR15-9A0A0B4J2B8 117 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 DCDC2BA2VCK2 349 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 GOLGA6L22H0YM25 854 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 TM4SF5O14894 197 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 SYNCRIPO60506 623 aaKnown RBP25.16■■□□□ 1.62
HLA-C-209ENST00000495835 IGLV3-25P01717 112 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 CLCN1P35523 988 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 MTA1Q13330 715 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 CKAP5Q14008 2032 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 FUT11Q495W5 492 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 TCP11X2Q5H9J9 407 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 PEAR1Q5VY43 1037 aaPredicted RBP25.16■■□□□ 1.62
HLA-C-209ENST00000495835 TMEM215Q68D42 235 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 DPY19L2P1Q6NXN4 242 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 TMEFF1Q8IYR6 380 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 FRMD1Q8N878 549 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 HJURPQ8NCD3 748 aaPredicted RBP25.16■■□□□ 1.62
HLA-C-209ENST00000495835 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.16■■□□□ 1.62
HLA-C-209ENST00000495835 GGA2Q9UJY4 613 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 CEP83Q9Y592 693 aa25.16■■□□□ 1.62
HLA-C-209ENST00000495835 APOEP02649 317 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 ATP5BP06576 529 aaKnown RBP25.15■■□□□ 1.62
HLA-C-209ENST00000495835 C7P10643 843 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 PABPC1P11940 636 aaKnown RBP25.15■■□□□ 1.62
HLA-C-209ENST00000495835 SLC6A4P31645 630 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 RPL6Q02878 288 aaKnown RBP25.15■■□□□ 1.62
HLA-C-209ENST00000495835 EIF4EBP2Q13542 120 aaPredicted RBP25.15■■□□□ 1.62
HLA-C-209ENST00000495835 LYSMD4Q5XG99 296 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 RFWD3Q6PCD5 774 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 RABEPKQ7Z6M1 372 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 FIBINQ8TAL6 211 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 PIGKQ92643 395 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 SMOC1Q9H4F8 434 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 PRDM16Q9HAZ2 1276 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 RXFP3Q9NSD7 469 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 SAMSN1Q9NSI8 373 aaKnown RBP25.15■■□□□ 1.62
HLA-C-209ENST00000495835 ABCB8Q9NUT2 735 aa25.15■■□□□ 1.62
HLA-C-209ENST00000495835 MED19A0JLT2 244 aaPredicted RBP25.14■■□□□ 1.62
HLA-C-209ENST00000495835 TBL1XO60907 577 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 TRUB2O95900 331 aaKnown RBP25.14■■□□□ 1.62
HLA-C-209ENST00000495835 SLC2A3P11169 496 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 PTGER3P43115 390 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 KCNMA1Q12791 1236 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 KLHDC7AQ5VTJ3 777 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 NADSYN1Q6IA69 706 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 SERPINA13PQ6UXR4 307 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 CHST9Q7L1S5 443 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 TAC4Q86UU9 113 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 ADIPOR2Q86V24 386 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 ZDHHC17Q8IUH5 632 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 CCDC117Q8IWD4 279 aaPredicted RBP25.14■■□□□ 1.62
HLA-C-209ENST00000495835 CEP76Q8TAP6 659 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 BTN2A3PQ96KV6 586 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 CPXM1Q96SM3 734 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 EDEM2Q9BV94 578 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 FBRSQ9HAH7 460 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 ITM2CQ9NQX7 267 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 TMEM51Q9NW97 253 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 SLC12A6Q9UHW9 1150 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 PILRBQ9UKJ0 227 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 NFE2L3Q9Y4A8 694 aa25.14■■□□□ 1.62
HLA-C-209ENST00000495835 GOLGA6L7A0A1B0GV03 622 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 HSF2BPO75031 334 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 OXTRP30559 389 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 CDK17Q00537 523 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 LMAN2Q12907 356 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 MS4A13Q5J8X5 152 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 C11orf57Q6ZUT1 292 aaPredicted RBP25.13■■□□□ 1.61
HLA-C-209ENST00000495835 SLC47A2Q86VL8 602 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 ATP6V0D2Q8N8Y2 350 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 SLC2A13Q96QE2 648 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 NUSAP1Q9BXS6 441 aaKnown RBP25.13■■□□□ 1.61
HLA-C-209ENST00000495835 TMEM245Q9H330 911 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 USP36Q9P275 1121 aaKnown RBP25.13■■□□□ 1.61
HLA-C-209ENST00000495835 AJAP1Q9UKB5 411 aaPredicted RBP25.13■■□□□ 1.61
HLA-C-209ENST00000495835 CYP8B1Q9UNU6 501 aa25.13■■□□□ 1.61
HLA-C-209ENST00000495835 LNP1A1A4G5 178 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 PES1O00541 588 aaKnown RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 EPHX1P07099 455 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 DLDP09622 509 aaKnown RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 POLR2EP19388 210 aaKnown RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 SGSHP51688 502 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 ZNF33AQ06730 810 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 CAMK2GQ13555 558 aaPredicted RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 DRAP1Q14919 205 aaPredicted RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 HSP90AA4PQ58FG1 418 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 DCAF6Q58WW2 860 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 TCEAL6Q6IPX3 200 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 SLC23A3Q6PIS1 610 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 TMPRSS6Q8IU80 811 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 MFN1Q8IWA4 741 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 C1orf131Q8NDD1 294 aaKnown RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 ADAM32Q8TC27 787 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 GPT2Q8TD30 523 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 FOXJ1Q92949 421 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 TCEAL3Q969E4 200 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 SIPA1Q96FS4 1042 aa25.12■■□□□ 1.61
HLA-C-209ENST00000495835 ZNF419Q96HQ0 510 aaPredicted RBP25.12■■□□□ 1.61
HLA-C-209ENST00000495835 NAA15Q9BXJ9 866 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms