RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 STARD6P59095 220 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 OGDHQ02218 1023 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 SCYL2Q6P3W7 929 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 LRRC8AQ8IWT6 810 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 DDI1Q8WTU0 396 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 HAPLN3Q96S86 360 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 NELL2Q99435 816 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 EPHX3Q9H6B9 360 aa17.72■□□□□ 0.43
HDAC6-235ENST00000495515 STK25O00506 426 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 PAGE1O75459 146 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 TYRP14679 529 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 TACR2P21452 398 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 ADRA1BP35368 520 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 EIF2DP41214 584 aaKnown RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 SOX9P48436 509 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 ATXN1P54253 815 aaKnown RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 FAM133BQ5BKY9 247 aaKnown RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 MS4A13Q5J8X5 152 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 RABGAP1LQ5R372 815 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 MPP7Q5T2T1 576 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 SH3PXD2AQ5TCZ1 1133 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 NADSYN1Q6IA69 706 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 LRRC31Q6UY01 552 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 CCDC117Q8IWD4 279 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 SUGP1Q8IWZ8 645 aaKnown RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 ZNF557Q8N988 423 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 HJURPQ8NCD3 748 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-235ENST00000495515 SLC35G2Q8TBE7 412 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 FAM3CQ92520 227 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 NTAN1Q96AB6 310 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 C1orf74Q96LT6 269 aa17.71■□□□□ 0.43
HDAC6-235ENST00000495515 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 KANSL1LA0AUZ9 987 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 KRBA1A5PL33 1030 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 TMEM221A6NGB7 291 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 M0R296 226 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 PRPSAP2O60256 369 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 TSPAN3O60637 253 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 PENKP01210 267 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-235ENST00000495515 PCK1P35558 622 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 TCEAL1Q15170 157 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 EFHC2Q5JST6 749 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 PIK3R6Q5UE93 754 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 TTC39BQ5VTQ0 682 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-235ENST00000495515 RAP1GAP2Q684P5 730 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 NUDT18Q6ZVK8 323 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 SLFN11Q7Z7L1 901 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 KIAA1328Q86T90 577 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 LGI2Q8N0V4 545 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 NIPA2Q8N8Q9 360 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 CD101Q93033 1021 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 CALR3Q96L12 384 aaKnown RBP17.7■□□□□ 0.42
HDAC6-235ENST00000495515 P2RY13Q9BPV8 354 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 TRIM7Q9C029 511 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 SIK2Q9H0K1 926 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 XPO7Q9UIA9 1087 aaKnown RBP17.7■□□□□ 0.42
HDAC6-235ENST00000495515 HS3ST4Q9Y661 456 aa17.7■□□□□ 0.42
HDAC6-235ENST00000495515 A0A0A6YYK5 440 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 GFRA2O00451 464 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 TRDMT1O14717 391 aaKnown RBP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 NCAM2O15394 837 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 CACNG3O60359 315 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 MTA2O94776 668 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 SLC6A4P31645 630 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 ARHGAP25P42331 645 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 NOP2P46087 812 aaKnown RBP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 VAV2P52735 878 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 ZNF252P-AS1Q0IIN9 211 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 SCAPQ12770 1279 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 GRSF1Q12849 480 aaKnown RBP eCLIP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 AUHQ13825 339 aaKnown RBP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 IER5LQ5T953 404 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 FYB2Q5VWT5 728 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 RFWD3Q6PCD5 774 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 BHMTQ93088 406 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 PDLIM2Q96JY6 352 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 PRMT1Q99873 361 aaKnown RBP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 SLC2A11Q9BYW1 496 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 OSBPL2Q9H1P3 480 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 TBC1D17Q9HA65 648 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 DEC1Q9P2X7 70 aa17.69■□□□□ 0.42
HDAC6-235ENST00000495515 KIF26AQ9ULI4 1882 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-235ENST00000495515 TBL1XO60907 577 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 PROSCO94903 275 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 MIPP30301 263 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 KIF5AQ12840 1032 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 HADHQ16836 314 aaKnown RBP17.68■□□□□ 0.42
HDAC6-235ENST00000495515 FBXL22Q6P050 247 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 PSTKQ8IV42 348 aaKnown RBP17.68■□□□□ 0.42
HDAC6-235ENST00000495515 NAT16Q8N8M0 369 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 FLCNQ8NFG4 579 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 BTBD6Q96KE9 485 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 RPRD1AQ96P16 312 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-235ENST00000495515 PNKPQ96T60 521 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 OSBPL6Q9BZF3 934 aa17.68■□□□□ 0.42
HDAC6-235ENST00000495515 LTB4R2Q9NPC1 389 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms