RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	STXBP5	Q5T5C0	1151 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	ADGRF1	Q5T601	910 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	HTR3D	Q70Z44	454 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	ARID3B	Q8IVW6	561 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	ZNF557	Q8N988	423 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	FAM71B	Q8TC56	605 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	SH3RF2	Q8TEC5	729 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	DEPDC1B	Q8WUY9	529 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	KRT35	Q92764	455 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	USP13	Q92995	863 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	ASB16	Q96NS5	453 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	CYP2S1	Q96SQ9	504 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	MAK16	Q9BXY0	300 aa	Known RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	ADAM33	Q9BZ11	813 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	CATSPERB	Q9H7T0	1116 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	THG1L	Q9NWX6	298 aa	Known RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	CFAP97	Q9P2B7	532 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	PACSIN2	Q9UNF0	486 aa	Predicted RBP	14.02	□□□□□ -0.17
APTX-231	ENST00000494973	NR2E1	Q9Y466	385 aa		14.02	□□□□□ -0.17
APTX-231	ENST00000494973	ZNF189	O75820	626 aa	Predicted RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	TJP3	O95049	919 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CYBB	P04839	570 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	IRF1	P10914	325 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	KDELR1	P24390	212 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	DNA2	P51530	1060 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	MLLT6	P55198	1093 aa	Predicted RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	TPI1	P60174	286 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CKAP4	Q07065	602 aa	Known RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	ZNF77	Q15935	545 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	AAK1	Q2M2I8	961 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	LEXM	Q3ZCV2	418 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	PPP6R3	Q5H9R7	873 aa	Predicted RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	KCNT1	Q5JUK3	1230 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CCDC181	Q5TID7	509 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	DAB2IP	Q5VWQ8	1189 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CHSY1	Q86X52	802 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	PLCD3	Q8N3E9	789 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CPXM2	Q8N436	756 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	TDRD5	Q8NAT2	981 aa	Known RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	ZNF592	Q92610	1267 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	TBC1D31	Q96DN5	1066 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	SLC22A12	Q96S37	553 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	OSBPL9	Q96SU4	736 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	CALN1	Q9BXU9	219 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	POMK	Q9H5K3	350 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	PCDH18	Q9HCL0	1135 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	ZFP14	Q9HCL3	533 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	EPS15L1	Q9UBC2	864 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	PPARGC1A	Q9UBK2	798 aa	Known RBP	14.01	□□□□□ -0.17
APTX-231	ENST00000494973	OR12D3	Q9UGF7	316 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	BRWD1	Q9NSI6	2320 aa		14.01	□□□□□ -0.17
APTX-231	ENST00000494973	DOCK6	Q96HP0	2047 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	GOLGA6L10	A0A0M3HER8	536 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	EEF2K	O00418	725 aa	Known RBP	14	□□□□□ -0.17
APTX-231	ENST00000494973	DAPK3	O43293	454 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	MBTPS2	O43462	519 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	TCF4	P15884	667 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	SERPINB6	P35237	376 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	PAFAH1B1	P43034	410 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	KCNQ1	P51787	676 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	CCDC85B	Q15834	202 aa	Predicted RBP	14	□□□□□ -0.17
APTX-231	ENST00000494973	MS4A13	Q5J8X5	152 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	SPOCD1	Q6ZMY3	1216 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973		Q6ZNB5	142 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	DENND1C	Q8IV53	801 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	CCDC117	Q8IWD4	279 aa	Predicted RBP	14	□□□□□ -0.17
APTX-231	ENST00000494973	FAM217A	Q8IXS0	508 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	BPIFB1	Q8TDL5	484 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	ALG3	Q92685	438 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	NXPE3	Q969Y0	559 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	ELSPBP1	Q96BH3	223 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	FAF2	Q96CS3	445 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	GKN1	Q9NS71	199 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973	AGO1	Q9UL18	857 aa	Known RBP	14	□□□□□ -0.17
APTX-231	ENST00000494973	TTC7A	Q9ULT0	858 aa	Predicted RBP	14	□□□□□ -0.17
APTX-231	ENST00000494973	HS3ST4	Q9Y661	456 aa		14	□□□□□ -0.17
APTX-231	ENST00000494973		H3BQ06	376 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	PGRMC1	O00264	195 aa	Known RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	CEP104	O60308	925 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	ECI2	O75521	394 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	PRAMEF12	O95522	483 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	LAMP2	P13473	410 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	TACR2	P21452	398 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	HOXC13	P31276	330 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	CDKN2B	P42772	138 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	IFNAR2	P48551	515 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	MARCKSL1	P49006	195 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	ARSE	P51690	589 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	OXCT1	P55809	520 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	SEMA3B	Q13214	749 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	DPYSL3	Q14195	570 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	PDGFRL	Q15198	375 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	TAZ	Q16635	292 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	RAB6C	Q53S08	254 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	FAM78A	Q5JUQ0	283 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	MPP7	Q5T2T1	576 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	PIK3R6	Q5UE93	754 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	RFX8	Q6ZV50	586 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms