RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 OR12D3Q9UGF7 316 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 SCML2Q9UQR0 700 aa17.07■□□□□ 0.32
ATG4B-225ENST00000494465 FOXO6A8MYZ6 492 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 E7EVH7 732 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 CDH16O75309 829 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 PARNO95453 639 aaKnown RBP17.06■□□□□ 0.32
ATG4B-225ENST00000494465 VNN2O95498 520 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 IVLP07476 585 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 SSTR1P30872 391 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 GLUD2P49448 558 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 BBS9Q3SYG4 887 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 ARTNQ5T4W7 220 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 BTBD8Q5XKL5 378 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 LEKR1Q6ZMV7 388 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATG4B-225ENST00000494465 CAPN12Q6ZSI9 719 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 NUP93Q8N1F7 819 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 NPWQ8N729 165 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 MDM1Q8TC05 714 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 CASP10Q92851 521 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 CCDC77Q9BR77 488 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 PRDM12Q9H4Q4 367 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 VPS37BQ9H9H4 285 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 NEU3Q9UQ49 428 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 A0A1W2PQH9 124 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 TRIM66O15016 1216 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 LRIG2O94898 1065 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 USP46P62068 366 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 C1orf53Q5VUE5 145 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 TAS1R1Q7RTX1 841 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
ATG4B-225ENST00000494465 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
ATG4B-225ENST00000494465 P2RY11Q96G91 374 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 CNOT10Q9H9A5 744 aaKnown RBP17.06■□□□□ 0.32
ATG4B-225ENST00000494465 IL37Q9NZH6 218 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 SFMBT1Q9UHJ3 866 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 TEX264Q9Y6I9 313 aa17.06■□□□□ 0.32
ATG4B-225ENST00000494465 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 EXOC1LA0A1B0GW35 172 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 AVILO75366 819 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 EFEMP2O95967 443 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 PDK1Q15118 436 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 TDRPQ86YL5 185 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 ARHGEF2Q92974 986 aaKnown RBP17.05■□□□□ 0.32
ATG4B-225ENST00000494465 SPATA13Q96N96 652 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 OSBPL2Q9H1P3 480 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 CRISPLD1Q9H336 500 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 RABGEF1Q9UJ41 708 aa17.05■□□□□ 0.32
ATG4B-225ENST00000494465 MSI1O43347 362 aaKnown RBP17.04■□□□□ 0.32
ATG4B-225ENST00000494465 APRTP07741 180 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 CREB1P16220 341 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ELK3P41970 407 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ZNF135P52742 658 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ANKRD20A2Q5SQ80 823 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ANKRD20A1Q5TYW2 823 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ANKRD20A3Q5VUR7 823 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 PPP1R21Q6ZMI0 780 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ZNF534Q76KX8 674 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 VPS52Q8N1B4 723 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ATP11CQ8NB49 1132 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 MCUQ8NE86 351 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 MAML1Q92585 1016 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 NUDT5Q9UKK9 219 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 MTMR11A4FU01 709 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 MAGEA3P43357 314 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 AP1B1Q10567 949 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 WASHC5Q12768 1159 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 GPR17Q13304 367 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 SEMA5AQ13591 1074 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 ZSCAN26Q16670 478 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 MON1AQ86VX9 555 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 RIBC1Q8N443 379 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-225ENST00000494465 EPAS1Q99814 870 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 FRMD8Q9BZ67 464 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-225ENST00000494465 TBK1Q9UHD2 729 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 CHMP2BQ9UQN3 213 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 LTBP2Q14767 1821 aa17.04■□□□□ 0.32
ATG4B-225ENST00000494465 FAM92AA1XBS5 289 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 RNF103O00237 685 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 PPP1R12AO14974 1030 aaPredicted RBP17.03■□□□□ 0.32
ATG4B-225ENST00000494465 SOAT2O75908 522 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 TPSB2P20231 275 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 ELAVL2Q12926 359 aaKnown RBP17.03■□□□□ 0.32
ATG4B-225ENST00000494465 TPSAB1Q15661 275 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 BRMS1LQ5PSV4 323 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 GPR152Q8TDT2 470 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 RNF34Q969K3 372 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 WBP1LQ9NX94 342 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 SHROOM3Q8TF72 1996 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 CHN1P15882 459 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 TSHRP16473 764 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 EPHB2P29323 1055 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 ARPP19P56211 112 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 ARHGEF18Q6ZSZ5 1173 aa17.03■□□□□ 0.32
ATG4B-225ENST00000494465 TAOK1Q7L7X3 1001 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms