RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 GRIK3Q13003 919 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 TUSC3Q13454 348 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CUL2Q13617 745 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 RAPGEF1Q13905 1077 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 TRIM14Q14142 442 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CBX2Q14781 532 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 WDR72Q3MJ13 1102 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 PAN2Q504Q3 1202 aaKnown RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ZNF667Q5HYK9 610 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 C9orf50Q5SZB4 431 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ADGRF1Q5T601 910 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 PDXDC1Q6P996 788 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CD300LGQ6UXG3 332 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CEP68Q76N32 757 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 MAMDC2Q7Z304 686 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CACNA2D4Q7Z3S7 1137 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 COLGALT2Q8IYK4 626 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 LRRC52Q8N7C0 313 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CCDC150Q8NCX0 1101 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ZNF397Q8NF99 534 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 OR8K1Q8NGG5 319 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ZNF830Q96NB3 372 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 GPR88Q9GZN0 384 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 SDCBP2Q9H190 292 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 NRDE2Q9H7Z3 1164 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 FBLN5Q9UBX5 448 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 DNAJB4Q9UDY4 337 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 SFMBT1Q9UHJ3 866 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 TRANK1O15050 2925 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 PRUNE2Q8WUY3 3088 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 RALGAPA2Q2PPJ7 1873 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 LRRC53A6NM62 1247 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 KPNA7A9QM74 516 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 C22orf46C9J442 243 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 PODXLO00592 558 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 GFPT2O94808 682 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 BAIAP3O94812 1187 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 CALCAP01258 141 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 TPM1P09493 284 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SKILP12757 684 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 FPR2P25090 351 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 USP8P40818 1118 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 STAT1P42224 750 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 RAP1GAPP47736 663 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 OR1G1P47890 313 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SLC11A1P49279 550 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 JAM2P57087 298 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 GSDMDP57764 484 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 LILRA4P59901 499 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 GPR85P60893 370 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 MYO1EQ12965 1108 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 LSAMPQ13449 338 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SHHQ15465 462 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 UPP1Q16831 310 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 XP32Q5T750 250 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SFMBT2Q5VUG0 894 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 PSRC1Q6PGN9 363 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 WDR59Q6PJI9 974 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 DCLRE1AQ6PJP8 1040 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SCARA5Q6ZMJ2 495 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 IRF2BP2Q7Z5L9 587 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 MTDHQ86UE4 582 aaKnown RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 LRRC8AQ8IWT6 810 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 UBR7Q8N806 425 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 HERVK_113Q902F9 699 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SHC3Q92529 594 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 ZNF689Q96CS4 500 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 IQCDQ96DY2 449 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 TRMT2BQ96GJ1 504 aaKnown RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 LIN37Q96GY3 246 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 TMEM169Q96HH4 297 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SENP8Q96LD8 212 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 FAM193BQ96PV7 902 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SPAG5Q96R06 1193 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 PANX2Q96RD6 677 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 MMS19Q96T76 1030 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 CHP1Q99653 195 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 ZFYVE21Q9BQ24 234 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 IMPG2Q9BZV3 1241 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SLC6A17Q9H1V8 727 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 SMYD3Q9H7B4 428 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 CLDND1Q9NY35 253 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 FBXL5Q9UKA1 691 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 PCDHB4Q9Y5E5 795 aa6.97□□□□□ -1.29
TRA2B-216ENST00000493864 TDRD15B5MCY1 1934 aaKnown RBP6.97□□□□□ -1.29
TRA2B-216ENST00000493864 FNDC1Q4ZHG4 1894 aaPredicted RBP6.96□□□□□ -1.29
TRA2B-216ENST00000493864 NT5C1B-RDH14C9J2C7 533 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 F8VZ95 297 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 I3L4J1 428 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 AQP7O14520 342 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 CYB561D2O14569 222 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 NRP1O14786 923 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 PLD2O14939 933 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 B3GAT3O94766 335 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ALDH2P05091 517 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 ITGB1P05556 798 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 GALTP07902 379 aa6.96□□□□□ -1.3
TRA2B-216ENST00000493864 KRT5P13647 590 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms