RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 RNF7Q9UBF6 113 aa4.91□□□□□ -1.62
ITGB1-216ENST00000493758 CDC23Q9UJX2 597 aa4.91□□□□□ -1.62
ITGB1-216ENST00000493758 LRCH1Q9Y2L9 728 aa4.91□□□□□ -1.62
ITGB1-216ENST00000493758 EMSYQ7Z589 1322 aa4.91□□□□□ -1.62
ITGB1-216ENST00000493758 PIP5K1BO14986 540 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 PPP6R2O75170 966 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 SKAP2O75563 359 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 RPP40O75818 363 aaKnown RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 CYP3A4P08684 503 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 CD63P08962 238 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 YY1P25490 414 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 PDIA3P30101 505 aaKnown RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 AGTR2P50052 363 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 POLE2P56282 527 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 GALNT1Q10472 559 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 FOXO1Q12778 655 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 ZACNQ401N2 412 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 PXDC1Q5TGL8 231 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 PGBD2Q6P3X8 592 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 RINLQ6ZS11 566 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 UEVLDQ8IX04 471 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 ZNF527Q8NB42 609 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 ADPRHL1Q8NDY3 354 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 OR52N4Q8NGI2 321 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 CELF1Q92879 486 aaKnown RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 ZNF48Q96MX3 618 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 PRPF18Q99633 342 aaKnown RBP4.9□□□□□ -1.63
ITGB1-216ENST00000493758 ELOVL1Q9BW60 279 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 MLXIPQ9HAP2 919 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 MTMR4Q9NYA4 1195 aa4.9□□□□□ -1.63
ITGB1-216ENST00000493758 SETD1BQ9UPS6 1966 aaKnown RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FAM90A18PA6NE21 464 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FAM90A16PA6NEW6 464 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 MBD3L5A6NJ08 208 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 AQP12BA6NM10 295 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FAM90A9PA6NNJ1 464 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FAM90A5PA8MXJ8 464 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 TLX3O43711 291 aaPredicted RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 LARGE1O95461 756 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 CER1O95813 267 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 ENO1P06733 434 aaKnown RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 RFPL3SP0C7P2 107 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FAM90A15PP0C7V4 464 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FAM90A14PP0C7W9 464 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 LMO1P25800 156 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 FOXL2P58012 376 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 B4GALNT1Q00973 533 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 ICA1Q05084 483 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 BRD3Q15059 726 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 EARS2Q5JPH6 523 aaKnown RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 TANGO2Q6ICL3 276 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 WDR93Q6P2C0 686 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 TMEM88Q6PEY1 159 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 EXD3Q8N9H8 876 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 PIGKQ92643 395 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 NPAS1Q99742 590 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 TRIM2Q9C040 744 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 PLCB1Q9NQ66 1216 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 PAPOLBQ9NRJ5 636 aaKnown RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 TRNAU1APQ9NX07 287 aaKnown RBP4.89□□□□□ -1.63
ITGB1-216ENST00000493758 AFG3L2Q9Y4W6 797 aa4.89□□□□□ -1.63
ITGB1-216ENST00000493758 CYP3A7-CYP3A51PA0A087WV96 503 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 SLC22A23A1A5C7 686 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 LGALS16A8MUM7 142 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 SOCS2O14508 198 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 ALDOAP04075 364 aaKnown RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 CYP3A7P24462 503 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 HOXD9P28356 352 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 SERPINF1P36955 418 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 VPS41P49754 854 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 TAS2R50P59544 299 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 HNRNPA0Q13151 305 aaKnown RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 P3H1Q32P28 736 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 LIN54Q6MZP7 749 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 RINT1Q6NUQ1 792 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 SHC4Q6S5L8 630 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 FAM57BQ71RH2 274 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 ANKRD13BQ86YJ7 626 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 ADGRF3Q8IZF5 1079 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 PAQR4Q8N4S7 273 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 SRFBP1Q8NEF9 429 aaKnown RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 CLMNQ96JQ2 1002 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 RMDN3Q96TC7 470 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 TRMOQ9BU70 441 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 CRB3Q9BUF7 120 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 AGO2Q9UKV8 859 aaKnown RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 MAGED2Q9UNF1 606 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 B3GNT3Q9Y2A9 372 aa4.88□□□□□ -1.63
ITGB1-216ENST00000493758 HEMK1Q9Y5R4 338 aaPredicted RBP4.88□□□□□ -1.63
ITGB1-216ENST00000493758 SLC38A8A6NNN8 435 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 F8W810 466 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 ACKR2O00590 384 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 CNTN5O94779 1100 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 ITGA2BP08514 1039 aa4.87□□□□□ -1.63
ITGB1-216ENST00000493758 AKR1A1P14550 325 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms