RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 STOML2Q9UJZ1 356 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 JRKLQ9Y4A0 524 aa12.89□□□□□ -0.35
SNX17-208ENST00000493711 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
SNX17-208ENST00000493711 MYO7AQ13402 2215 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 USP27XA6NNY8 438 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
SNX17-208ENST00000493711 ACSL4O60488 711 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 HMBSP08397 361 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 CTNNA2P26232 953 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 CORO1AP31146 461 aaKnown RBP12.88□□□□□ -0.35
SNX17-208ENST00000493711 CETN2P41208 172 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 KCNQ1P51787 676 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 NRG1Q02297 640 aaPredicted RBP12.88□□□□□ -0.35
SNX17-208ENST00000493711 PDK2Q15119 407 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 ZNF77Q15935 545 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 ADGRF1Q5T601 910 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 LRRC31Q6UY01 552 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 VSIG1Q86XK7 387 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 ARFGAP1Q8N6T3 406 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 BPIFB1Q8TDL5 484 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 PRDM16Q9HAZ2 1276 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 GKN1Q9NS71 199 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 DONSONQ9NYP3 566 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 FZD10Q9ULW2 581 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 PCDHA3Q9Y5H8 950 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 CAPN6Q9Y6Q1 641 aa12.88□□□□□ -0.35
SNX17-208ENST00000493711 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 ARHGAP33O14559 1287 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 PAGE1O75459 146 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 PRAMEF12O95522 483 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 IRF1P10914 325 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 CTNNA1P35221 906 aaKnown RBP12.87□□□□□ -0.35
SNX17-208ENST00000493711 MLLT6P55198 1093 aaPredicted RBP12.87□□□□□ -0.35
SNX17-208ENST00000493711 GNG11P61952 73 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 SLC25A11Q02978 314 aaKnown RBP12.87□□□□□ -0.35
SNX17-208ENST00000493711 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 MEI1Q5TIA1 1274 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 TTC39BQ5VTQ0 682 aaPredicted RBP12.87□□□□□ -0.35
SNX17-208ENST00000493711 Q6ZNB5 142 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 MFSD6LQ8IWD5 586 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 YAF2Q8IY57 180 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 KATNAL2Q8IYT4 538 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 RCOR2Q8IZ40 523 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 CD101Q93033 1021 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 KCNK17Q96T54 332 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 EPAS1Q99814 870 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 IGSF9Q9P2J2 1179 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 RCOR3Q9P2K3 495 aaPredicted RBP12.87□□□□□ -0.35
SNX17-208ENST00000493711 CDH22Q9UJ99 828 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 AP4E1Q9UPM8 1137 aa12.87□□□□□ -0.35
SNX17-208ENST00000493711 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 TYW5A2RUC4 315 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 HEPACAM2A8MVW5 462 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 GREM1O60565 184 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 FTCDO95954 541 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 MOCS2O96007 188 aaPredicted RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 RARAP10276 462 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 L1CAMP32004 1257 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 ARL4AP40617 200 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 HCAR3P49019 387 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 ATXN1P54253 815 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 RWDD2BP57060 319 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 COPS2P61201 443 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 ETF1P62495 437 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 CAMK2BQ13554 666 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 DPYSL2Q16555 572 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 RABGAP1LQ5R372 815 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 ZFYVE27Q5T4F4 411 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 FAM217AQ8IXS0 508 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 CCDC185Q8N715 623 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 KCTD6Q8NC69 237 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 RBM41Q96IZ5 413 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 SNRNP25Q9BV90 132 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 SMG9Q9H0W8 520 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 ZWILCHQ9H900 591 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 STIM2Q9P246 746 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 OR12D3Q9UGF7 316 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 AGO1Q9UL18 857 aaKnown RBP12.86□□□□□ -0.35
SNX17-208ENST00000493711 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
SNX17-208ENST00000493711 F5H5T6 163 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 H3BRJ5 948 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 ZRANB2O95218 330 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX17-208ENST00000493711 KLKB1P03952 638 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 CYBBP04839 570 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 PSMC3P17980 439 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 FCARP24071 287 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 IL1R2P27930 398 aa12.85□□□□□ -0.35
SNX17-208ENST00000493711 VIPR2P41587 438 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms