RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 F9P00740 461 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 IGLV3-25P01717 112 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 CYP1A1P04798 512 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 HOXB2P14652 356 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 HNRNPLP14866 589 aaKnown RBP eCLIP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 CHRNB2P17787 502 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 TNFAIP3P21580 790 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 HOXD9P28356 352 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 SLC6A4P31645 630 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 CCR1P32246 355 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NSFP46459 744 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 PXNP49023 591 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 UBASH3AP57075 661 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NOMO3P69849 1222 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 FMO1Q01740 532 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NME3Q13232 169 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 BYSLQ13895 437 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 MS4A13Q5J8X5 152 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 FAM102AQ5T9C2 384 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NAA35Q5VZE5 725 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 RFWD3Q6PCD5 774 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 TMEM92Q6UXU6 159 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 PRR23BQ6ZRT6 265 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 ANKS1BQ7Z6G8 1248 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 LUZP1Q86V48 1076 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 CHPFQ8IZ52 775 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 PGBD3Q8N328 593 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 SUMF1Q8NBK3 374 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 HJURPQ8NCD3 748 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 WFIKKN2Q8TEU8 576 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 SLC20A1Q8WUM9 679 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 GAB3Q8WWW8 586 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 RUBCNQ92622 972 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 PIWIL1Q96J94 861 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 BTN2A3PQ96KV6 586 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NAP1L5Q96NT1 182 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 AGPAT1Q99943 283 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NUP58Q9BVL2 599 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 EDEM3Q9BZQ6 932 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 CIPCQ9C0C6 399 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 WDCPQ9H6R7 721 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 SEPT11Q9NVA2 429 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 POLR3BQ9NW08 1133 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 DDIT4Q9NX09 232 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 ELOVL2Q9NXB9 296 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 COX16Q9P0S2 106 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 STIM2Q9P246 746 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 BCCIPQ9P287 314 aaKnown RBP eCLIP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 NCDNQ9UBB6 729 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 MYO6Q9UM54 1294 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 PLA2G4CQ9UP65 541 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 PAXBP1Q9Y5B6 917 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 WDFY4Q6ZS81 3184 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ANTXRLA6NF34 631 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 F5H5T6 163 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 H0Y626 953 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 GOLGA8SH3BPF8 625 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 SYNCRIPO60506 623 aaKnown RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ADAM23O75077 832 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 RHOBTB1O94844 696 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 CALB1P05937 261 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ATP5BP06576 529 aaKnown RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 UNGP13051 313 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 TACR2P21452 398 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 MMP8P22894 467 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 WASP42768 502 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 SULT1E1P49888 294 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 PITX1P78337 314 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 FANCCQ00597 558 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 DEUP1Q05D60 604 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 EIF4EBP2Q13542 120 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 EIF4HQ15056 248 aaKnown RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 GEN1Q17RS7 908 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 SLC25A52Q3SY17 297 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 FAM133BQ5BKY9 247 aaKnown RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 BRMS1LQ5PSV4 323 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 RABGAP1LQ5R372 815 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ACBD5Q5T8D3 534 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 SFMBT2Q5VUG0 894 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 EGFLAMQ63HQ2 1017 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 RAP1GAP2Q684P5 730 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 LAIR1Q6GTX8 287 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 NADSYN1Q6IA69 706 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ANO7Q6IWH7 933 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 PPP1R2P3Q6NXS1 205 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 MMS22LQ6ZRQ5 1243 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 CHST9Q7L1S5 443 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ARCQ7LC44 396 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 C11orf74Q86VG3 221 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 RASSF3Q86WH2 238 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 CHSY1Q86X52 802 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 XYLT1Q86Y38 959 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 MFN1Q8IWA4 741 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 LGI2Q8N0V4 545 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 AHI1Q8N157 1196 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 CARNMT1Q8N4J0 409 aa7.23□□□□□ -1.25
TOP3A-207ENST00000493648 GPR161Q8N6U8 529 aaKnown RBP7.23□□□□□ -1.25
TOP3A-207ENST00000493648 SLC30A5Q8TAD4 765 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms