RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ANLNQ9NQW6 1124 aa17.83■□□□□ 0.44
LIME1-208ENST00000493265 USP18Q9UMW8 372 aa17.83■□□□□ 0.44
LIME1-208ENST00000493265 SNX10Q9Y5X0 201 aa17.83■□□□□ 0.44
LIME1-208ENST00000493265 WNT6Q9Y6F9 365 aa17.83■□□□□ 0.44
LIME1-208ENST00000493265 NUMBLQ9Y6R0 609 aa17.83■□□□□ 0.44
LIME1-208ENST00000493265 GOLGA6L7A0A1B0GV03 622 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 H0Y858 1186 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 TRDMT1O14717 391 aaKnown RBP17.82■□□□□ 0.44
LIME1-208ENST00000493265 PAGE1O75459 146 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 FTCDO95954 541 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 MAN1A1P33908 653 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 SLC11A2P49281 568 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 TAS2R40P59535 323 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 HTR4Q13639 388 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 HADHQ16836 314 aaKnown RBP17.82■□□□□ 0.44
LIME1-208ENST00000493265 SMTNL2Q2TAL5 461 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 ARL13BQ3SXY8 428 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 BRMS1LQ5PSV4 323 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 C11orf63Q6NUN7 778 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 VITQ6UXI7 678 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 SLFN11Q7Z7L1 901 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 PLCD3Q8N3E9 789 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 HSPH1Q92598 858 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 ELSPBP1Q96BH3 223 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 ZFYVE19Q96K21 471 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 CALR3Q96L12 384 aaKnown RBP17.82■□□□□ 0.44
LIME1-208ENST00000493265 MAGEB5Q9BZ81 275 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 DCLK3Q9C098 648 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 AGO1Q9UL18 857 aaKnown RBP17.82■□□□□ 0.44
LIME1-208ENST00000493265 SORCS3Q9UPU3 1222 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 ZKSCAN5Q9Y2L8 839 aa17.82■□□□□ 0.44
LIME1-208ENST00000493265 ZFHX2Q9C0A1 2572 aaPredicted RBP17.82■□□□□ 0.44
LIME1-208ENST00000493265 DOCK8Q8NF50 2099 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 E2F8A0AVK6 867 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 KCNU1A8MYU2 1149 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 GREM1O60565 184 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 TSPAN3O60637 253 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 IL1R2P27930 398 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 ADRA1BP35368 520 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 PCK1P35558 622 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 KCNT1Q5JUK3 1230 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 RAP1GAP2Q684P5 730 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 TXNRD3NBQ6F5E7 133 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 HTR3DQ70Z44 454 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 PEX26Q7Z412 305 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 SYCE1Q8N0S2 351 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 LRRC57Q8N9N7 239 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 BTN2A3PQ96KV6 586 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 ALS2CR12Q96Q35 445 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 NCAPGQ9BPX3 1015 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 SNRNP25Q9BV90 132 aaKnown RBP17.81■□□□□ 0.44
LIME1-208ENST00000493265 LINC00597Q9H2U6 94 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 KLHL11Q9NVR0 708 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 THG1LQ9NWX6 298 aaKnown RBP17.81■□□□□ 0.44
LIME1-208ENST00000493265 ARHGEF38Q9NXL2 777 aa17.81■□□□□ 0.44
LIME1-208ENST00000493265 GOLGA6L9A6NEM1 432 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 I6L893 689 aaPredicted RBP17.8■□□□□ 0.44
LIME1-208ENST00000493265 ACSL4O60488 711 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 ECI2O75521 394 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 ASGR2P07307 311 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 SLC1A1P43005 524 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 IFNAR2P48551 515 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 DNA2P51530 1060 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 SLC25A11Q02978 314 aaKnown RBP17.8■□□□□ 0.44
LIME1-208ENST00000493265 ATP13A4Q4VNC1 1196 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 EFHC2Q5JST6 749 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 ZNF569Q5MCW4 686 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 ERMARDQ5T6L9 678 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 RFWD3Q6PCD5 774 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 CHSY1Q86X52 802 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 MFSD6LQ8IWD5 586 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 ZDHHC14Q8IZN3 488 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 PYROXD2Q8N2H3 581 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 E2F7Q96AV8 911 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 DHX35Q9H5Z1 703 aaKnown RBP17.8■□□□□ 0.44
LIME1-208ENST00000493265 DUS2Q9NX74 493 aaKnown RBP17.8■□□□□ 0.44
LIME1-208ENST00000493265 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
LIME1-208ENST00000493265 AMFRQ9UKV5 643 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 FZD10Q9ULW2 581 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 PACSIN2Q9UNF0 486 aaPredicted RBP17.8■□□□□ 0.44
LIME1-208ENST00000493265 AP4E1Q9UPM8 1137 aa17.8■□□□□ 0.44
LIME1-208ENST00000493265 ANHXE9PGG2 379 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 KIF5CO60282 957 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 SRGAP2O75044 1071 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 RARAP10276 462 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 PSMC3P17980 439 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 GDI1P31150 447 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 CA9Q16790 459 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 MS4A13Q5J8X5 152 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 PIK3R6Q5UE93 754 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 NADSYN1Q6IA69 706 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 Q6ZNB5 142 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 UBALD2Q8IYN6 164 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 TTC8Q8TAM2 541 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 BHMTQ93088 406 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 IRF2BPLQ9H1B7 796 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 KCNK12Q9HB15 430 aa17.79■□□□□ 0.44
LIME1-208ENST00000493265 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms