RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 NPC1O15118 1278 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 TRIM24O15164 1050 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 TSPAN3O60637 253 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ABCB7O75027 752 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 APBB3O95704 486 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 MOCS2O96007 188 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 F9P00740 461 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC6A4P31645 630 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 PRKCIP41743 596 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 SULT1E1P49888 294 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 DGKEP52429 567 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ASIC2Q16515 512 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC25A52Q3SY17 297 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 C2CD6Q53TS8 623 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ZC3H12AQ5D1E8 599 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 MS4A13Q5J8X5 152 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 BRMS1LQ5PSV4 323 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 TTC39BQ5VTQ0 682 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 SFMBT2Q5VUG0 894 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 NADSYN1Q6IA69 706 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 CHSY1Q86X52 802 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ALLCQ8N6M5 410 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 TXNDC5Q8NBS9 432 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 TSTD1Q8NFU3 115 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 WFIKKN2Q8TEU8 576 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 UCMAQ8WVF2 138 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 RNF34Q969K3 372 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 PRICKLE1Q96MT3 831 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 PCDHB18PQ96TA0 734 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 NPY6RQ99463 290 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 EPC1Q9H2F5 836 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 METTL5Q9NRN9 209 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ADAM22Q9P0K1 906 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 IFNKQ9P0W0 207 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 TMEM59LQ9UK28 342 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ITIH6Q6UXX5 1313 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 MYO15AQ9UKN7 3530 aa11.05□□□□□ -0.64
CDC42SE1-206ENST00000492796 ATG2BQ96BY7 2078 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 SYNJ2BP-COX16A0A087WUM0 186 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 GOLGA6L7A0A1B0GV03 622 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 PRRT4C9JH25 899 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 F5H5T6 163 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 SGK1O00141 431 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 CBFA2T2O43439 604 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 TBL1XO60907 577 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 ALDH1A2O94788 518 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 KLF8O95600 359 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 LMNAP02545 664 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 HNRNPLP14866 589 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 TACR2P21452 398 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 HLA-FP30511 346 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 NTSR1P30989 418 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 FLT3P36888 993 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 FNTBP49356 437 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 SGSHP51688 502 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 DMWDQ09019 674 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 PTP4A2Q12974 167 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 NME3Q13232 169 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 CRY1Q16526 586 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 GEN1Q17RS7 908 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 ACBD5Q5T8D3 534 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 OTUD1Q5VV17 481 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 EGFLAMQ63HQ2 1017 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 SDE2Q6IQ49 451 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 RFWD3Q6PCD5 774 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 MON1BQ7L1V2 547 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 MFN1Q8IWA4 741 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 CCDC117Q8IWD4 279 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 AHI1Q8N157 1196 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 CCDC33Q8N5R6 958 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 C3orf20Q8ND61 904 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 SLC30A5Q8TAD4 765 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 SYT11Q9BT88 431 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 POLMQ9NP87 494 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 PIGVQ9NUD9 493 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 EBF1Q9UH73 591 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 CLEC4EQ9ULY5 219 aa11.04□□□□□ -0.64
CDC42SE1-206ENST00000492796 MUC22E2RYF6 1773 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 AXIN1O15169 862 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 TIMM44O43615 452 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 GFRA3O60609 400 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 ADAM23O75077 832 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 HOXB2P14652 356 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 TNFAIP3P21580 790 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 CXCR3P49682 368 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 ZBED6P86452 979 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 DEUP1Q05D60 604 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 KLHL30Q0D2K2 578 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 CDH18Q13634 790 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 RABGAP1LQ5R372 815 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 EMC10Q5UCC4 262 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 RAP1GAP2Q684P5 730 aa11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 HEATR6Q6AI08 1181 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-206ENST00000492796 BNIPLQ7Z465 357 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms