RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 DBX2Q6ZNG2 339 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 PROSER1Q86XN7 944 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 CACUL1Q86Y37 369 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 ZC3H3Q8IXZ2 948 aaKnown RBP20.76■□□□□ 0.91
NELFE-212ENST00000492539 SCML4Q8N228 414 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 UBR7Q8N806 425 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.76■□□□□ 0.91
NELFE-212ENST00000492539 BAHD1Q8TBE0 780 aaPredicted RBP20.76■□□□□ 0.91
NELFE-212ENST00000492539 KCTD13Q8WZ19 329 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 GAREM1Q9H706 876 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 SFMBT1Q9UHJ3 866 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 EIF2B4Q9UI10 523 aaKnown RBP20.76■□□□□ 0.91
NELFE-212ENST00000492539 ATRXP46100 2492 aa20.76■□□□□ 0.91
NELFE-212ENST00000492539 KNL1Q8NG31 2342 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 YJEFN3A6XGL0 299 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 E7ENQ6 273 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 SLC16A3O15427 465 aaKnown RBP20.75■□□□□ 0.91
NELFE-212ENST00000492539 TSPAN3O60637 253 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 SMC2O95347 1197 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 MATKP42679 507 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 RING1Q06587 406 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 BSPRYQ5W0U4 402 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 CHST9Q7L1S5 443 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 ADIPOR2Q86V24 386 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 PNPLA1Q8N8W4 532 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 SPATA20Q8TB22 786 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 GSDMAQ96QA5 445 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 LHX5Q9H2C1 402 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 TM7SF3Q9NS93 570 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 ABCC13Q9NSE7 274 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 LMBRD1Q9NUN5 540 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 RMND1Q9NWS8 449 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 HESX1Q9UBX0 185 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 FNDC3AQ9Y2H6 1198 aaKnown RBP20.75■□□□□ 0.91
NELFE-212ENST00000492539 CABIN1Q9Y6J0 2220 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 ITPR1Q14643 2758 aa20.75■□□□□ 0.91
NELFE-212ENST00000492539 TP53BP1Q12888 1972 aaPredicted RBP20.75■□□□□ 0.91
NELFE-212ENST00000492539 O00370 1275 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 SETSIPP0DME0 302 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 VDRP11473 427 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 HOXB3P14651 431 aaPredicted RBP20.74■□□□□ 0.91
NELFE-212ENST00000492539 YWHAEP62258 255 aaKnown RBP20.74■□□□□ 0.91
NELFE-212ENST00000492539 PTPRNQ16849 979 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 HLA-BQ31612 363 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 PKDCCQ504Y2 493 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 COBLL1Q53SF7 1204 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 DCAF17Q5H9S7 520 aaPredicted RBP20.74■□□□□ 0.91
NELFE-212ENST00000492539 ADGRF1Q5T601 910 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 TCERG1LQ5VWI1 586 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 LRSAM1Q6UWE0 723 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 SLCO6A1Q86UG4 719 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 AHI1Q8N157 1196 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 RNF139Q8WU17 664 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 CYB5D2Q8WUJ1 264 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 EDEM1Q92611 657 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 TMA16Q96EY4 203 aaKnown RBP20.74■□□□□ 0.91
NELFE-212ENST00000492539 CNGB3Q9NQW8 809 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 KIAA1522Q9P206 1035 aaPredicted RBP20.74■□□□□ 0.91
NELFE-212ENST00000492539 BAHCC1Q9P281 2608 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 GGA2Q9UJY4 613 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 APOBEC2Q9Y235 224 aaKnown RBP20.74■□□□□ 0.91
NELFE-212ENST00000492539 PCDHGB2Q9Y5G2 931 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 SLCO1B1Q9Y6L6 691 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 ADAMTS20P59510 1910 aa20.74■□□□□ 0.91
NELFE-212ENST00000492539 GOLGA6L22H0YM25 854 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 CD19P15391 556 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 ACSL1P33121 698 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 PRCPP42785 496 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 SGSHP51688 502 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 DAOAP59103 153 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 SCAPQ12770 1279 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 FNDC3BQ53EP0 1204 aaKnown RBP20.73■□□□□ 0.91
NELFE-212ENST00000492539 MSANTD2Q6P1R3 559 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 CCNI2Q6ZMN8 369 aaPredicted RBP20.73■□□□□ 0.91
NELFE-212ENST00000492539 FAM124AQ86V42 546 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 SIX6OS1Q8N1H7 587 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 UBA3Q8TBC4 463 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 SMARCE1Q969G3 411 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 IRX2Q9BZI1 471 aaPredicted RBP20.73■□□□□ 0.91
NELFE-212ENST00000492539 C6orf106Q9H6K1 298 aaPredicted RBP20.73■□□□□ 0.91
NELFE-212ENST00000492539 FBRSQ9HAH7 460 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 OSGEPQ9NPF4 335 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 ABCB8Q9NUT2 735 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 LHX6Q9UPM6 363 aa20.73■□□□□ 0.91
NELFE-212ENST00000492539 A0A1B0GVT2 93 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 MSI1O43347 362 aaKnown RBP20.72■□□□□ 0.91
NELFE-212ENST00000492539 IGLV3-27P01718 113 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 PABPC1P11940 636 aaKnown RBP20.72■□□□□ 0.91
NELFE-212ENST00000492539 ZNF366Q8N895 744 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 SETD7Q8WTS6 366 aaKnown RBP20.72■□□□□ 0.91
NELFE-212ENST00000492539 SLC35C1Q96A29 364 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 PRSS16Q9NQE7 514 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 TOR4AQ9NXH8 423 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 KIAA1257Q9ULG3 409 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 PLA2G4CQ9UP65 541 aa20.72■□□□□ 0.91
NELFE-212ENST00000492539 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.72■□□□□ 0.91
NELFE-212ENST00000492539 FLRT2O43155 660 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 DKK1O94907 266 aa20.71■□□□□ 0.91
NELFE-212ENST00000492539 TBXAS1P24557 533 aaPredicted RBP20.71■□□□□ 0.91
NELFE-212ENST00000492539 CSNK1EP49674 416 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms