RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 TBCBQ99426 244 aa18.39■□□□□ 0.53
LMNB1-206ENST00000492190 NUP58Q9BVL2 599 aa18.39■□□□□ 0.53
LMNB1-206ENST00000492190 ANLNQ9NQW6 1124 aa18.39■□□□□ 0.53
LMNB1-206ENST00000492190 METTL5Q9NRN9 209 aaKnown RBP18.39■□□□□ 0.53
LMNB1-206ENST00000492190 PIGVQ9NUD9 493 aa18.39■□□□□ 0.53
LMNB1-206ENST00000492190 ADAM22Q9P0K1 906 aa18.39■□□□□ 0.53
LMNB1-206ENST00000492190 GVINP1Q7Z2Y8 2422 aa18.39■□□□□ 0.53
LMNB1-206ENST00000492190 MUC22E2RYF6 1773 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-206ENST00000492190 TCRBV5S1A1TA0A578 114 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 I6L893 689 aaPredicted RBP18.38■□□□□ 0.53
LMNB1-206ENST00000492190 AP5Z1O43299 807 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 ATG13O75143 517 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 CYBBP04839 570 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 GYPCP04921 128 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 CCDC172P0C7W6 258 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 NSFP46459 744 aaKnown RBP18.38■□□□□ 0.53
LMNB1-206ENST00000492190 ATXN1P54253 815 aaKnown RBP18.38■□□□□ 0.53
LMNB1-206ENST00000492190 NME3Q13232 169 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 GEN1Q17RS7 908 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 RAB6CQ53S08 254 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 C10orf76Q5T2E6 689 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 HGSNATQ68CP4 663 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 DNAAF5Q86Y56 855 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 ALLCQ8N6M5 410 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 ZBTB44Q8NCP5 570 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 FAM122AQ96E09 287 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 PRMT1Q99873 361 aaKnown RBP18.38■□□□□ 0.53
LMNB1-206ENST00000492190 RAB6CQ9H0N0 254 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.38■□□□□ 0.53
LMNB1-206ENST00000492190 CAPN11Q9UMQ6 739 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 SLC27A6Q9Y2P4 619 aa18.38■□□□□ 0.53
LMNB1-206ENST00000492190 ADAM23O75077 832 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 KLF8O95600 359 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-206ENST00000492190 APOEP02649 317 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 TNFAIP3P21580 790 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 GBP1P32455 592 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 CXCR3P49682 368 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 SULT1E1P49888 294 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 GSCP56915 257 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-206ENST00000492190 RPS24P62847 133 aaKnown RBP18.37■□□□□ 0.53
LMNB1-206ENST00000492190 MRPS21P82921 87 aaKnown RBP18.37■□□□□ 0.53
LMNB1-206ENST00000492190 DMC1Q14565 340 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 PPP2R5DQ14738 602 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 SLC25A52Q3SY17 297 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 MS4A13Q5J8X5 152 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 RAP1GAP2Q684P5 730 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 SYT13Q7L8C5 426 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 ARCQ7LC44 396 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 PGAP3Q96FM1 320 aaPredicted RBP18.37■□□□□ 0.53
LMNB1-206ENST00000492190 BTN2A3PQ96KV6 586 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 CFAP57Q96MR6 1250 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 ACOX2Q99424 681 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 ZSCAN32Q9NX65 697 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 RRN3Q9NYV6 651 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 MMP17Q9ULZ9 603 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 STARD13Q9Y3M8 1113 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 ITIH6Q6UXX5 1313 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 RALGAPA1Q6GYQ0 2036 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 GON4LQ3T8J9 2241 aa18.37■□□□□ 0.53
LMNB1-206ENST00000492190 SGK1O00141 431 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 DDX3XO00571 662 aaKnown RBP eCLIP18.36■□□□□ 0.538e-31■■■□□ 15.3
LMNB1-206ENST00000492190 TBL1XO60907 577 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 ADCY5O95622 1261 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 TACR2P21452 398 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 CCR1P32246 355 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 PXNP49023 591 aaPredicted RBP18.36■□□□□ 0.53
LMNB1-206ENST00000492190 FNTBP49356 437 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 ZBED6P86452 979 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
LMNB1-206ENST00000492190 KLHL30Q0D2K2 578 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 EGFLAMQ63HQ2 1017 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 TMEM215Q68D42 235 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 ACAD10Q6JQN1 1059 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 TMEM92Q6UXU6 159 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 MCOLN2Q8IZK6 566 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 TXNDC5Q8NBS9 432 aaKnown RBP18.36■□□□□ 0.53
LMNB1-206ENST00000492190 HHIPQ96QV1 700 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 SLC2A11Q9BYW1 496 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 IRX2Q9BZI1 471 aaPredicted RBP18.36■□□□□ 0.53
LMNB1-206ENST00000492190 TMPRSS4Q9NRS4 437 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 STAP1Q9ULZ2 295 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 PLXND1Q9Y4D7 1925 aa18.36■□□□□ 0.53
LMNB1-206ENST00000492190 CEP192Q8TEP8 1941 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 C2CD4BA6NLJ0 364 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 TMCO5BA8MYB1 307 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 PROB1E7EW31 1015 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 LILRB5O75023 590 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 CALB1P05937 261 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-206ENST00000492190 HLA-FP30511 346 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 HOXA6P31267 233 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 CASP14P31944 242 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 GGCXP38435 758 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 PREPLQ4J6C6 727 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-206ENST00000492190 MPP7Q5T2T1 576 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 ARTNQ5T4W7 220 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 SH3PXD2AQ5TCZ1 1133 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 HEATR6Q6AI08 1181 aaKnown RBP18.35■□□□□ 0.53
LMNB1-206ENST00000492190 CHSY1Q86X52 802 aa18.35■□□□□ 0.53
LMNB1-206ENST00000492190 LGI2Q8N0V4 545 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms