RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 SCARA5Q6ZMJ2 495 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 Q6ZNB5 142 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 GPRIN1Q7Z2K8 1008 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 ACOT1Q86TX2 421 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 MKRN2Q9H000 416 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 SLC25A18Q9H1K4 315 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 TNMDQ9H2S6 317 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 FBXO44Q9H4M3 255 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 CSNK1G1Q9HCP0 422 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 CYLDQ9NQC7 956 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 TLR8Q9NR97 1041 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 PLK2Q9NYY3 685 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 PCDHB1Q9Y5F3 818 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 STON1Q9Y6Q2 735 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 MYH10P35580 1976 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 SPENQ96T58 3664 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 KCNK3O14649 394 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 MDM4O15151 490 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 YKT6O15498 198 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 VNN1O95497 513 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 ACO1P21399 889 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 ACP1P24666 158 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 ATP5C1P36542 298 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 MAP3K7CLP57077 242 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 SNRPFP62306 86 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 IL9RQ01113 521 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 ENPP2Q13822 863 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 FAM26FQ5R3K3 315 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 CNNM4Q6P4Q7 775 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 KANSL1Q7Z3B3 1105 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 NELFCDQ8IXH7 590 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 SAP25Q8TEE9 199 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 BHMTQ93088 406 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 NUP58Q9BVL2 599 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 NMUR1Q9HB89 426 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 TM9SF3Q9HD45 589 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 THAP10Q9P2Z0 257 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 HMGXB4Q9UGU5 601 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 LSM7Q9UK45 103 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 NUDT5Q9UKK9 219 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 SLC27A6Q9Y2P4 619 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
CACNA1C-228ENST00000492150 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 CYP26A1O43174 497 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 PHACTR2O75167 634 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 C4BPAP04003 597 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 CKMT2P17540 419 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 TPMTP51580 245 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 ZNF132P52740 706 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 EHHADHQ08426 723 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 CUL4AQ13619 759 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 NCOA4Q13772 614 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 STARD3Q14849 445 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 BMT2Q1RMZ1 405 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 KLHDC10Q6PID8 442 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 GATAD2AQ86YP4 633 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 C12orf56Q8IXR9 622 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 C12orf29Q8N999 325 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 EXTL1Q92935 676 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 CCNL2Q96S94 520 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 ELF4Q99607 663 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 SCML2Q9UQR0 700 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 CRYBG3Q68DQ2 2970 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 UBE4BO95155 1302 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 LRRK1Q38SD2 2015 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 NUMA1Q14980 2115 aa12.28□□□□□ -0.44
CACNA1C-228ENST00000492150 NF1P21359 2839 aa12.27□□□□□ -0.44
CACNA1C-228ENST00000492150 CKAP5Q14008 2032 aa12.27□□□□□ -0.44
CACNA1C-228ENST00000492150 A0A1W2PQH9 124 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 STC2O76061 302 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 PENKP01210 267 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 KLKB1P03952 638 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 ITGAVP06756 1048 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 FAM87AP0C7U9 286 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 RARGP13631 454 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 PDCP20941 246 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 SYT1P21579 422 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 CASRP41180 1078 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 PLA2G4AP47712 749 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 NDST1P52848 882 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 COPAP53621 1224 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 MFAP3P55082 362 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 CLDN10P78369 228 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 GOLGA8FQ08AF8 430 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 GOLGA8DPQ0D2H9 430 aa12.27□□□□□ -0.45
CACNA1C-228ENST00000492150 BIRC3Q13489 604 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms